| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1461 |
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| Symbol | rpmA |
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| ID | 5712639 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 1518373 |
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| End bp | 1518642 |
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| Gene Length | 270 bp |
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| Protein Length | 89 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641267375 |
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| Product | 50S ribosomal protein L27 |
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| Protein accession | YP_001532804 |
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| Protein GI | 159044010 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0211] Ribosomal protein L27 |
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| TIGRFAM ID | [TIGR00062] ribosomal protein L27 |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.0317862 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCACATA AAAAAGCAGG CGGTTCATCC CGGAACGGGC GCGACTCCGC GGGCCGTCGC
CTCGGCGTCA AGAAATTCGG TGGCGAGACC GTCATCCCCG GCAACATCAT CCTGCGTCAG
CGCGGCACCA AGTGGTGGCC GGGCGACAAT GTGGGCATGG GCAAGGACCA CACCCTCTTT
GCGACCGTGG AAGGCAACGT GTCGTTCAAG AAGGGTTTCA AGGGCCGGAC CTTCGTATCC
GTGCTCCCGG TCGCCGAGGC CGCCGAGTAA
|
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| Protein sequence | MAHKKAGGSS RNGRDSAGRR LGVKKFGGET VIPGNIILRQ RGTKWWPGDN VGMGKDHTLF
ATVEGNVSFK KGFKGRTFVS VLPVAEAAE
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