Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_1440 |
Symbol | |
ID | 5712617 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | + |
Start bp | 1495960 |
End bp | 1496892 |
Gene Length | 933 bp |
Protein Length | 310 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641267353 |
Product | transcriptional regulator |
Protein accession | YP_001532783 |
Protein GI | 159043989 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 0.820273 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCATTATG TTGCAGCCAT GGACATCACG CTCTTTCGCG ATCTCGACCG GCTGCGGCAA ACCGGAAATT TCTCCCAGGC CGCGGCGCTG GTCAATCTCA GCCAACCGGC CTTCAGCCGC CGGATCAAGT CCCTTGAGAA ATGGGTGGGC GCGGTTCTGG TCGATCGCTC GCGTCAGCCG GTGGTGCTGA CCGAGGCAGG AACCCAGATG CTGGAGGCGG GGATGCAGGC GCTGGCCCGG ATCGAGCAGG AGCGCAGCCA GATCCGGGAG GCACAATCCC TGCCGGACAA ATACGTGGTG ACCTTCGCCA CCCAGCATTC CATCGGCTGG CGCTTCTATC CGGCCTGGTT GCAGGCGCTG GAAGAGGCTT ACGGGCCCAT CTTGTCGCGC CTGCGGGCGG ATGATCTGCC CAACTGCCTG AATGACCTCA AACAGGGCGC CGTGGATTTC GTCATCGCCT ACGCCAGCGC CGAAATCCGC CCCCAGGCCG GGCAGCCGGG CGTGCGGATC GGGTCGGATG ACCTGATCCC GGTCTGCAAG CCCGACGGGG CGGGCGCGCC GATCTACGAT TGCGCCGCCG CCGGGGTGCG GATGCCCTTC CTGCGGTTCG GGGATGCCGC GCCGATCGGG ATGCATCTGG AGCCGCTCTT TGCCGCTCAC GGCCTGCGCA GCCGGTTTCG CACGGTCTAC GAGAATTCCA TGGCGGGGGC CTTGCGGATC CGGGCGCGGG CGGGCGACGG GGTGGCCTGG CTGCCCCATA GCCTCGTCGC ACCGGACTTG GCCGGTGGTC TGCTGGTGCG TACCGGCCCG CCGGATTGGG ACATCCCCCT CGAGATCCTG ATCTACCGGA ACGCCGAGCG GTCCAACCGC GTGACCCGCG CGCTCTGGTC CTTTCTGGAG GTTCGGCAGG CGGTCAGCCT CGTGCCTGCC TGA
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Protein sequence | MHYVAAMDIT LFRDLDRLRQ TGNFSQAAAL VNLSQPAFSR RIKSLEKWVG AVLVDRSRQP VVLTEAGTQM LEAGMQALAR IEQERSQIRE AQSLPDKYVV TFATQHSIGW RFYPAWLQAL EEAYGPILSR LRADDLPNCL NDLKQGAVDF VIAYASAEIR PQAGQPGVRI GSDDLIPVCK PDGAGAPIYD CAAAGVRMPF LRFGDAAPIG MHLEPLFAAH GLRSRFRTVY ENSMAGALRI RARAGDGVAW LPHSLVAPDL AGGLLVRTGP PDWDIPLEIL IYRNAERSNR VTRALWSFLE VRQAVSLVPA
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