Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_1385 |
Symbol | |
ID | 5712561 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | + |
Start bp | 1438594 |
End bp | 1438992 |
Gene Length | 399 bp |
Protein Length | 132 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641267297 |
Product | endoribonuclease L-PSP |
Protein accession | YP_001532728 |
Protein GI | 159043934 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0251] Putative translation initiation inhibitor, yjgF family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.246518 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGCGCC CGCTCAGTCC CGATACGATC CGTCCGCCCT TTGCGCGCTA TGCCCACGGG GTCGAGGTGC CCGCGGGGGC GCGGCTCGTG GTCTGTTCGG GGCAGTTGGG GATCGGACCC GATGACGTGG CCCCCGACAG TGCCGAGGCC CAGGCCGCCC TGTGTTTCGC CAATCTCGAC GCGGTGCTGG CGGAAGGCGG GATGGGGCGG GCGGACGTGG TGCGGATCAA CGCCTATGTC ACCGACCGCA CCCACATGAC CGGCTACATG GCCGCGCGGG ACGCCTGGCT CTCGGCGGTG CCCGATCACC TGCCGGCCTC GACCCTGATG ATCGTGTCGG GCTTCACCCG CCCGGAGTTC AAGGTCGAGA TCGAGCTGAT CGCCGCACAG ATGCCCTGA
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Protein sequence | MLRPLSPDTI RPPFARYAHG VEVPAGARLV VCSGQLGIGP DDVAPDSAEA QAALCFANLD AVLAEGGMGR ADVVRINAYV TDRTHMTGYM AARDAWLSAV PDHLPASTLM IVSGFTRPEF KVEIELIAAQ MP
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