Gene Dshi_1376 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_1376 
Symbol 
ID5712552 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp1429916 
End bp1430713 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content68% 
IMG OID641267288 
Productcreatininase 
Protein accessionYP_001532719 
Protein GI159043925 
COG category[R] General function prediction only 
COG ID[COG1402] Uncharacterized protein, putative amidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.199935 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGAGC GACGGCATTG GTGGGCGGAG TACCGCACGA CGGAGTTTGA CGGTCTGGAC 
CCGGAACGTG TTATCGCGAT CCTGCCCACG GCCGCGATCG AGCAGCACGG ACCGCACCTG
CCCACGGGCA CCGATACGAT GATCATGGCC GGGATGCTGG ACGCGCTCTG CGCCGCTTTG
CCCGAGGACC TGAACATCCG CATTTTGCCG ATCCAGGCGG TGGGCAAGTC GAACGAGCAT
ATCCACGCCC CCGGCACCCT GACCCTGGAG GCGGAGACCG CCCTTGGTGC CTGGCGGGAA
ACCGGTCTGT CGGTCGCGCG CGCGGGGCTG CGCAAGATCG TCTGCGTCAA CTCCCATGGC
GGCAACCTGG ACCTGGTGTC GATCCTCAGC CGCGAGCTTC GCGTGCGGGC CGGGATGTTG
GCGGTGAAGA CCCAGTGGAT GAGCTTCGGC ACGCCGGAGG GGATGTATTC CGACACCGAG
CGCGCCTTCG GCATCCATGG CGGGGATGTG GAAACCTCGC TGATGCTGCA TTTCCAGCCC
CATACCGTGG ACATGGCGCA GGCGCGGAAT TTCGCCTCGA CTGCCCAGGG CGCCCCGATC
TCGCCCATCG GGCCGGTGAG CCTGGGCTGG GTGTCGTCGG ACCTGAACGC CGCCGGCACC
GTGGGCGATG CCAGTGCCGC CACCGCCGCC AAGGGGGAGG CGACCTGTGC CCATCAGGTG
GGGGGCATGA TCGACCTGCT CAGGAAGCTG CGCGACCTGC CCCTGGACGG GATCGCGCCA
ACCTACCCTG ATCTCTGA
 
Protein sequence
MAERRHWWAE YRTTEFDGLD PERVIAILPT AAIEQHGPHL PTGTDTMIMA GMLDALCAAL 
PEDLNIRILP IQAVGKSNEH IHAPGTLTLE AETALGAWRE TGLSVARAGL RKIVCVNSHG
GNLDLVSILS RELRVRAGML AVKTQWMSFG TPEGMYSDTE RAFGIHGGDV ETSLMLHFQP
HTVDMAQARN FASTAQGAPI SPIGPVSLGW VSSDLNAAGT VGDASAATAA KGEATCAHQV
GGMIDLLRKL RDLPLDGIAP TYPDL