| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1366 |
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| Symbol | |
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| ID | 5712542 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 1418987 |
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| End bp | 1420312 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641267278 |
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| Product | beta alanine--pyruvate transaminase |
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| Protein accession | YP_001532709 |
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| Protein GI | 159043915 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0161] Adenosylmethionine-8-amino-7-oxononanoate aminotransferase |
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| TIGRFAM ID | [TIGR00508] adenosylmethionine-8-amino-7-oxononanoate transaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.528214 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACTGG ATGCGAAGTC CCGTCCGAAT GACCTGAGTG CATTCTGGAT GCCGTTCACC
GCCAATCGGC AGTTCAAGTC AAATCCCCGG ATGTTCGTCG CCGCCGACGG CATGTATTAC
ACGACCGCCG AAGGGCGACA GGTGCTCGAC GGCACGGCGG GGCTGTGGTG CTGCAATGCG
GGCCACAAGC GGCCCAGGAT CGTCGAGGCG ATCCAGGCCC AGGCGGCGGA GCTTGACTAT
GCGCCGGCCT TCCAGATGGG GCACCCCAGA GCGTTCGAGC TGGCCAATCG CCTTGTCGAG
ATCGCGCCTG ACGGAATGGA CCATGTTTTC TACACGAATT CCGGATCCGA GGCGGTTGAA
TCGGCTTTGA AAATTGCCCT TGCCTATCAT CGCGCGCGGG GTGAGGCGGG GCGCACGCGC
CTGATCGGAC GCGAGCGTGG GTATCACGGC GTCAATTTCG GCGGCATTTC TGTCGGCGGC
ATCGTCAACA ATCGCAAGCA TTTCGGCACC TTGCTGACCG GGGTGGATCA CCTGCCGCAC
ACCCATATCC CGGAGAACCA GTGGTCCAGG GGGATGCCGG AGCTTGGGGC GCACCTGGCC
GATGACCTCG AACGGATCAT CGCGCTGCAT GGGGCCGAGA CCATCGCCGC CGTGATCGTG
GAGCCGATGG CGGGTTCGAC GGGGGTTCTG CTGCCGCCCA AGGGATACTT ACAGAGGTTG
AGGAAGATCA CGCAAGATCA CGGAATCGTT CTGATATTCG ACGAGGTAAT CACCGGGTTC
GGCCGGGTCG GTGCGGCGTT CGGTGCGCAG CGCTTCGGCG TCACGCCGGA CATGATCACC
TGCGCCAAGG GGCTGACCAA CGGGGTCATT CCCATGGGCG CGGTGCTCTG CGGCAGCCAT
ATCCATGACG CTTTCATGCA AGGGCCCGAG AACCTGATCG AGCTTTTCCA CGGCTACACC
TATTCCGGCA ACCCGATCGC CTCCGCCGCC GGTCTCGCCA CGCTGGAAAC CTACCGCGAA
GACGATCTTT TCGCCCGTGC GCTGGACCTG GAGCCCTATT GGCAAGAGGC GCTGCATTCT
CTCAAGGGCG CGCGCCATGT GATCGACATC CGCAATCTCG GCCTGATCGG CGCGATCGAG
CTGGAGCCGA TTTCGGGGCA CCCGACCAAG CGCGCTTTCC AGGCTTTCCT GGATGCCTAT
GACAAGGGCG TGTTGATCCG CACCACCGGG GACATCATCG CGCTCTCGCC TCCGCTGATC
ATCGAGACAG CGCAGATCGA CCGGATCGTC GAGACGCTGG GCGAGGTGCT CGCCGCGCTC
GATTGA
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| Protein sequence | MALDAKSRPN DLSAFWMPFT ANRQFKSNPR MFVAADGMYY TTAEGRQVLD GTAGLWCCNA
GHKRPRIVEA IQAQAAELDY APAFQMGHPR AFELANRLVE IAPDGMDHVF YTNSGSEAVE
SALKIALAYH RARGEAGRTR LIGRERGYHG VNFGGISVGG IVNNRKHFGT LLTGVDHLPH
THIPENQWSR GMPELGAHLA DDLERIIALH GAETIAAVIV EPMAGSTGVL LPPKGYLQRL
RKITQDHGIV LIFDEVITGF GRVGAAFGAQ RFGVTPDMIT CAKGLTNGVI PMGAVLCGSH
IHDAFMQGPE NLIELFHGYT YSGNPIASAA GLATLETYRE DDLFARALDL EPYWQEALHS
LKGARHVIDI RNLGLIGAIE LEPISGHPTK RAFQAFLDAY DKGVLIRTTG DIIALSPPLI
IETAQIDRIV ETLGEVLAAL D
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