| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1358 |
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| Symbol | |
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| ID | 5711909 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 1410984 |
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| End bp | 1411760 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641267270 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001532701 |
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| Protein GI | 159043907 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.469708 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.558071 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGGAGG TCGTGCAAGC CGCCCTGTTC AAGCGCCTCT TCGGGCTCGA GGGCAAGCGC
GCGCTGATCA CCGGCGCGTC CAGCGGGATC GGCGCGCATC TGGCGCTCAC CCTGGGCCAG
GCGGGGGCGG AGGTGATCCT GGCCGCGCGC CGGGCGGACC GGCTGGAGGC CGTTGCCGAG
ACGTTGCGCG CCGAGGGGAT CGTGGCGCAG ACCGCGGCGC TGGATGTGAC CGATGCGGCG
TCGGTGGCCG CGGCAGTCAC CACCGTTGGA CCACTCGATA TTCTGATCAA CAATTCCGGG
GTTTCGGGTC AGGACATGGT GATCGACACC ACCGAGGCGG ATTGGGACCG TGTGCTGGAC
ACGAACCTCA AGGGGGCCTG GCGTGTCTCG CGGGCCTTCG CGCCGGGGCT GATCGCGCGG
CAGGGCACGA TCCTGAACGT GGCGTCGATC CTGGGCATCG GGGTGCTCAA GACCGTGGGG
CCTTATGCGG CGTCGAAGGC CGGGCTGATC CAGCTGACGC GCGCCATGGC GCTGGAGCTG
GCGCGCGACG GGGTGCGCGT GAATGCGCTG GCGCCGGGCT ATATCGAGAC GCCGATCAAC
ACCGAGTTCT TCGCCAGCGA GGCGGGGCAG AAGATGCTGC GCGGCGTGCC CCAGCGCCGT
CTGGGCCAGC CCGGGGATCT CGATGCGGCG GTGCTGATGC TGCTGGGGCC GGGGGCGGGC
TTTGTGACGG GCGCGACCGT GGTGGTCGAT GGCGGACATA CACTCGCGCT CAGCTGA
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| Protein sequence | MQEVVQAALF KRLFGLEGKR ALITGASSGI GAHLALTLGQ AGAEVILAAR RADRLEAVAE
TLRAEGIVAQ TAALDVTDAA SVAAAVTTVG PLDILINNSG VSGQDMVIDT TEADWDRVLD
TNLKGAWRVS RAFAPGLIAR QGTILNVASI LGIGVLKTVG PYAASKAGLI QLTRAMALEL
ARDGVRVNAL APGYIETPIN TEFFASEAGQ KMLRGVPQRR LGQPGDLDAA VLMLLGPGAG
FVTGATVVVD GGHTLALS
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