Gene Dshi_1268 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_1268 
SymboliolC 
ID5711826 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp1316838 
End bp1317839 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content68% 
IMG OID641267180 
ProductPfkB domain protein 
Protein accessionYP_001532611 
Protein GI159043817 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0524] Sugar kinases, ribokinase family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.63046 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.760626 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGGACG TTCTCGAAGC TATCCGAAGC CGGAATTTCC TTGTGATCGG GCGGGTCGGC 
ATGGACTTGT CGCCCGCCCC CGCGGGCACG GCCATCGAGG ACGCCACCGA CCTGATGGTT
GCCATGGGCG GGTCGTCGGC CAATATCGCC GCCGGTCTGG TGAAGTTCGG CGCAAGAGCG
GCCCTGGTCA CGCGGGTGTC CGACGATGCG GTCGGGCGCT ACTGCCTGAA CCAGCTCGCC
GCCTACGGGG TCGATGCGAC CCACGTGACG CCGGTGGCGG GCGAGTTTCG CAATTCTCTC
GCGCTTTATG AAAGCCGCTT GGCGGACCAC AACTCGGTCA TCTACCGCAA CGGGGCGGCG
GATTTCCAGA TGAGCGTCGC CGATGTCGAG GCCGTCGATT ACAGCCAGTA TGGCGCGCTG
ATCACCGCGG GCACCGTCTT CGCCGCAGAG CCGTCGCGCA GCGCCACCTT CCGCGCCTTC
GAGTTGGCCC GCGCCGCCGG GCTGCCGATC ATATTCGACG TGGATTACCG CCCCTATAGC
TGGCCTTCCC CCCAAGTCGC CGAAGAGGTG CTGTCGCGCG CGGGGGCCCT GTCGGACATC
ATCGTCGCCA ATGACGAGGA ATTCGGCTTC ATGGCCGGCG GGATCGACAA GGGCCTCGCC
AAGGCCCGCG AGCTGGCGCA AACCAGTGCC GGCATCGTGG TCTACAAGAT GGGGCCGGAG
GGTGCGATCA CCTTCGCAAA CGGCACCGAG CTGCGCACAG GCATCTACCC GGTCACGGCG
CTCAAACCCA CCGGCGCGGG CGACAGTTTC ATGGCCGGGT TTCTCGCAAG CCTCGCCGAG
GGCCGCGAGT TGCGCGAGGC CGTCCTGCGT GGCTCGGCCT GCGCGGCCAT CGTGGTGGCC
AAGCCCGGCT GCGCCCCCGC CATGCCCGAT GCGCGGGAGC TCGACGCGTT CCTTGCCCGC
CATCCCGGCC CCCGCAACGC CCCGCAGCCC GCGGAAGGAT AA
 
Protein sequence
MMDVLEAIRS RNFLVIGRVG MDLSPAPAGT AIEDATDLMV AMGGSSANIA AGLVKFGARA 
ALVTRVSDDA VGRYCLNQLA AYGVDATHVT PVAGEFRNSL ALYESRLADH NSVIYRNGAA
DFQMSVADVE AVDYSQYGAL ITAGTVFAAE PSRSATFRAF ELARAAGLPI IFDVDYRPYS
WPSPQVAEEV LSRAGALSDI IVANDEEFGF MAGGIDKGLA KARELAQTSA GIVVYKMGPE
GAITFANGTE LRTGIYPVTA LKPTGAGDSF MAGFLASLAE GRELREAVLR GSACAAIVVA
KPGCAPAMPD ARELDAFLAR HPGPRNAPQP AEG