Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_1268 |
Symbol | iolC |
ID | 5711826 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | - |
Start bp | 1316838 |
End bp | 1317839 |
Gene Length | 1002 bp |
Protein Length | 333 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641267180 |
Product | PfkB domain protein |
Protein accession | YP_001532611 |
Protein GI | 159043817 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0524] Sugar kinases, ribokinase family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.63046 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 0.760626 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGGACG TTCTCGAAGC TATCCGAAGC CGGAATTTCC TTGTGATCGG GCGGGTCGGC ATGGACTTGT CGCCCGCCCC CGCGGGCACG GCCATCGAGG ACGCCACCGA CCTGATGGTT GCCATGGGCG GGTCGTCGGC CAATATCGCC GCCGGTCTGG TGAAGTTCGG CGCAAGAGCG GCCCTGGTCA CGCGGGTGTC CGACGATGCG GTCGGGCGCT ACTGCCTGAA CCAGCTCGCC GCCTACGGGG TCGATGCGAC CCACGTGACG CCGGTGGCGG GCGAGTTTCG CAATTCTCTC GCGCTTTATG AAAGCCGCTT GGCGGACCAC AACTCGGTCA TCTACCGCAA CGGGGCGGCG GATTTCCAGA TGAGCGTCGC CGATGTCGAG GCCGTCGATT ACAGCCAGTA TGGCGCGCTG ATCACCGCGG GCACCGTCTT CGCCGCAGAG CCGTCGCGCA GCGCCACCTT CCGCGCCTTC GAGTTGGCCC GCGCCGCCGG GCTGCCGATC ATATTCGACG TGGATTACCG CCCCTATAGC TGGCCTTCCC CCCAAGTCGC CGAAGAGGTG CTGTCGCGCG CGGGGGCCCT GTCGGACATC ATCGTCGCCA ATGACGAGGA ATTCGGCTTC ATGGCCGGCG GGATCGACAA GGGCCTCGCC AAGGCCCGCG AGCTGGCGCA AACCAGTGCC GGCATCGTGG TCTACAAGAT GGGGCCGGAG GGTGCGATCA CCTTCGCAAA CGGCACCGAG CTGCGCACAG GCATCTACCC GGTCACGGCG CTCAAACCCA CCGGCGCGGG CGACAGTTTC ATGGCCGGGT TTCTCGCAAG CCTCGCCGAG GGCCGCGAGT TGCGCGAGGC CGTCCTGCGT GGCTCGGCCT GCGCGGCCAT CGTGGTGGCC AAGCCCGGCT GCGCCCCCGC CATGCCCGAT GCGCGGGAGC TCGACGCGTT CCTTGCCCGC CATCCCGGCC CCCGCAACGC CCCGCAGCCC GCGGAAGGAT AA
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Protein sequence | MMDVLEAIRS RNFLVIGRVG MDLSPAPAGT AIEDATDLMV AMGGSSANIA AGLVKFGARA ALVTRVSDDA VGRYCLNQLA AYGVDATHVT PVAGEFRNSL ALYESRLADH NSVIYRNGAA DFQMSVADVE AVDYSQYGAL ITAGTVFAAE PSRSATFRAF ELARAAGLPI IFDVDYRPYS WPSPQVAEEV LSRAGALSDI IVANDEEFGF MAGGIDKGLA KARELAQTSA GIVVYKMGPE GAITFANGTE LRTGIYPVTA LKPTGAGDSF MAGFLASLAE GRELREAVLR GSACAAIVVA KPGCAPAMPD ARELDAFLAR HPGPRNAPQP AEG
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