Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_1218 |
Symbol | |
ID | 5711776 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | - |
Start bp | 1258541 |
End bp | 1260055 |
Gene Length | 1515 bp |
Protein Length | 504 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641267130 |
Product | protein of unknown function DUF112 transmembrane |
Protein accession | YP_001532561 |
Protein GI | 159043767 |
COG category | [S] Function unknown |
COG ID | [COG3333] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0239741 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 0.788975 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATATCT TCCCGCTTCT GGCTGAAGGC TTTGCCACAT CGCTCTCGCC GCTCAACATC TTCATCGTCC TGATCGGGGT CACGGTCGGG CTCTTCATCG GGGCCATGCC GGGCCTCGGG TCGGTCAACG GGGTCGCCAT CGTGCTGCCC CTGACCTTCG TGGTCCCGCC CGCCTCGGCG ATCATCCTGC TCTGCGCCAT TTACTACGGC GCGATGTACG GGGGCGCGGT CAGCTCGATC CTGCTGGGGA TACCCGGCGC GTCCACTGCC GTGGCCACCA CCTTCGACGG GCGGCCCATG GCGCAGAAGG GCGAGGCGGG CCTGGCGCTG ATCGCGGCGG CCGTGGCGTC CTTCATCGGG GGGACGATCT CGGTCATCCT GTTCACCGCC TTCGCCATCC CACTGGCGGA TCTCGCGCTC GCCTTCGGAC CAGCGGAGGA ATTCGCCCTC GTGCTGCTGG CCTTCACCAC CTTCGTGGGG CTGGGCGGCG ATGACGCGCT GAAAACCATC GTGATGATCT GCCTTGGCCT CGTGCTCAGC ACCGTGGGGC TCGACCTGAT CTCGGGCCAG CCGCGGCTGA TCTTCGGCGA CCTGCCGGGG TTTTATTCGG GCATTTCCTT TCTGGTGCTG GCCATCGGGG TCTACGGGAT CGGCGAGATC CTCTATACCA TTGAAACCTC GAAGAAATCG CCAACGGTCA CGGCGGCCAA GATCACGTTT TCCGAGCTGG GCGCGGGCCT GCGCCGGATG AACAAGCTGT GGAAGACCAT GTCCATGGGA TCCTTCCTCG GCTTCTTCGT CGGCATGCTG CCCGCCGCCG GGGCCACGCC CGCGGCGCTC ATGGCCTACG GGATCGCGCG CACCACGTCG AAGAAGTCCG AGAATTTCGG CAAGGGCGAG ATCGAGGGCG TCGCCGCCCC CGAGACCGCG AACAACGCCG CCTCCACCGG ATCGCTGCTG CCGATGCTGA CGCTGGGCAT TCCCGGCTCG CCCACCACGG CGCTGCTGCT CGGGGGCATG GTGATGTGGG GGCTGGTGCC TGGTCCGATG CTGTTCATCG AGCAGCCGGA TTTCGTCTGG GGCATGATCT CTTCGCTCTA TACGGCCAAT GTGGCGGCGG TGCTGATCAA CCTGGCACTC ATACCACTCT TTGTCTGGGC CTTGCGGATG CCGTTCACGG TGCTCTGCTC GGTGGTCGTG GTGCTCTGCA TCGTGGGCGG CTTCGCGCCC TCCCAGAAGA TCCACGATGT CTGGCTGATC GCGGCCTTCG GCATCCTGGG CTACATCCTG CGCAAGGCGG ATTACCCGCT GGCCCCGCTG GTTCTGGCCC TGGTGCTCGG CCCGCTGATG GAGAAGAGCT TCCGTCAGAG CCTGGTGATG GAGCAGGGCA ACGTGTTCGT GTTCGTCGAG CGTCCTCTTT CGGCCACCTT CATGGTGCTG GCCCTGATCT TCTTCCTGCT TCCGCTTTTG AAGTACCTAA AGAAACCGGC TAAGAAGCCC GTGGCGGTCA AGTAA
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Protein sequence | MDIFPLLAEG FATSLSPLNI FIVLIGVTVG LFIGAMPGLG SVNGVAIVLP LTFVVPPASA IILLCAIYYG AMYGGAVSSI LLGIPGASTA VATTFDGRPM AQKGEAGLAL IAAAVASFIG GTISVILFTA FAIPLADLAL AFGPAEEFAL VLLAFTTFVG LGGDDALKTI VMICLGLVLS TVGLDLISGQ PRLIFGDLPG FYSGISFLVL AIGVYGIGEI LYTIETSKKS PTVTAAKITF SELGAGLRRM NKLWKTMSMG SFLGFFVGML PAAGATPAAL MAYGIARTTS KKSENFGKGE IEGVAAPETA NNAASTGSLL PMLTLGIPGS PTTALLLGGM VMWGLVPGPM LFIEQPDFVW GMISSLYTAN VAAVLINLAL IPLFVWALRM PFTVLCSVVV VLCIVGGFAP SQKIHDVWLI AAFGILGYIL RKADYPLAPL VLALVLGPLM EKSFRQSLVM EQGNVFVFVE RPLSATFMVL ALIFFLLPLL KYLKKPAKKP VAVK
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