| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1098 |
|---|
| Symbol | |
|---|
| ID | 5711066 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dinoroseobacter shibae DFL 12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009952 |
|---|
| Strand | + |
|---|
| Start bp | 1126077 |
|---|
| End bp | 1127306 |
|---|
| Gene Length | 1230 bp |
|---|
| Protein Length | 409 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 641267009 |
|---|
| Product | major facilitator superfamily MFS_1 |
|---|
| Protein accession | YP_001532441 |
|---|
| Protein GI | 159043647 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGACTCG TGCCCCTTGC CGAAGCCGCC GAACTGCCCC GTTGGCGGCA ACCGGTGACG
CTGCTGTTCC TGATGGCCTT TGCGATGCCC ATCGCGTTTG CCACCTGGAG CGCGCTTCTC
AACAATTTCG TGATCGAGCG GGCGGCCTTC ACCGGTGTGG AGATCGGCTG GCTGCATACG
GTGCGGGAGA TCCCGGGCTT CCTCGCCGTG GGTGTCATCG CCCTGATCAT GATCATCCGC
GAACAGGTTC TGGGCCTCGC CTCGCTCTGC CTTTTGGGGC TGGCCAGTGC CATGACCGGG
TTTTTCCCGA CCTATTACGG CATTCTGGCG CTGACGCTGC TCAGTTCCAT CGGGTTTCAC
TATTATGAGA CGGTCAATCA GTCCCTGCAA CTGCAATGGA TCGCCAAGGA CCGCGCCCCG
CAGACCCTGG GCTGGATCGT GGCGGCGGGC TCGGCGGCGT CGCTCCTGAG CTATGGCACG
CTGGTCGTCA GCTGGAAGGC CTTCGATCTG AGCTACAGCT TCGTCTACCT GACATCGGGC
GGGATCACGG CGGCGATCGC GCTGTTTTGC ATGTTCGCCT ATCCGCAATT CGAGAGCCCC
AATCCGCAGA ACAAGCGCAT GGTGCTGCGG CGGCGTTACT GGCTTTACTA CGCGCTGCAA
TTCATGTCCG GGGCGCGGCG GCAGATTTTC GTGGTCTTCG CCGCCTTCAT GATGGTCGAG
CATTTCGGCT TCGAGGTGCA TCAGGTCACG GCCCTGTTCC TGATCAACTT CCTTGCCAAC
ATGCTCTGTG CGCCGCTCAT GGGCAAAGCC GTCGCGCGGT TCGGGGAGCG CAACGCGCTC
GCCTTTGAAT ATACCGGCCT GATCTGTGTC TTCCTGGCCT ATGGCGGCAT CTATTGGCTG
GGCTGGGGGG TGATGGTGGC CGCGGCGCTC TATGTGCTGG ATCACCTGTT CTTCGCACTG
GCTTTCGCGC TGAAGACCTA TTTCCAGAAG ATCGCGGACC CCGCGGACAT CGCGCCCACG
GCCGCGGTGG CCTTCACGAT CAACCATATC GCGGCGGTGT TCCTGCCGGC CTCGCTGGGC
TACATGTGGG TCGTGTCGCC GGCGGGCGTT TTCTGGCTGG CCGCTGCCAT GGCTGCGACC
TCTTTGTTCC TGTCGTTGCT GATCCCGCGC CATCCGGGCC CGGGGCACGA GACGATCTTC
CAGTCCCGCC TCGCCACCCC GGCGGAGTAG
|
|---|
| Protein sequence | MRLVPLAEAA ELPRWRQPVT LLFLMAFAMP IAFATWSALL NNFVIERAAF TGVEIGWLHT
VREIPGFLAV GVIALIMIIR EQVLGLASLC LLGLASAMTG FFPTYYGILA LTLLSSIGFH
YYETVNQSLQ LQWIAKDRAP QTLGWIVAAG SAASLLSYGT LVVSWKAFDL SYSFVYLTSG
GITAAIALFC MFAYPQFESP NPQNKRMVLR RRYWLYYALQ FMSGARRQIF VVFAAFMMVE
HFGFEVHQVT ALFLINFLAN MLCAPLMGKA VARFGERNAL AFEYTGLICV FLAYGGIYWL
GWGVMVAAAL YVLDHLFFAL AFALKTYFQK IADPADIAPT AAVAFTINHI AAVFLPASLG
YMWVVSPAGV FWLAAAMAAT SLFLSLLIPR HPGPGHETIF QSRLATPAE
|
|---|
| |