| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1090 |
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| Symbol | |
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| ID | 5711058 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 1118068 |
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| End bp | 1118565 |
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| Gene Length | 498 bp |
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| Protein Length | 165 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641267001 |
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| Product | tripartite ATP-independent periplasmic transporter DctQ component |
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| Protein accession | YP_001532433 |
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| Protein GI | 159043639 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3090] TRAP-type C4-dicarboxylate transport system, small permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.0890905 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.431557 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCTTGA TAACTTCCCT GTCCCGGTAC GCCTGCATCT GCGGTGCGGT GCTGATGGCG
TTGACCGGCG TGATGCTCAC CTACGAGGTG GTGGCGCGGT ATTTCTTCAT CCGGCCCACG
ATCTGGGCGG CGGAGTTGAG CCAGCTGTGC CTGATCTGGG GCTGCCTGCT GGCCATGGCG
CACCTGCTGA CCCTGCGCCG GCACATCACC GTCAACGCGG TCACGGGGCT TCTGCCGCCG
GGCGCGCAAA AGGTCTGCGC CGGGATCGCG CTGGTGGTGG TGATCGTCTT CTCGGCCATC
GTGACGATTT ACGGCTTCGA CATCTTCTGG ACGAGCTTTG AGCGGGGGCG CACCACGGGC
TCGATCCTGA ACCTGCCGAT CTGGATCTCC GAGGCCTCCG TGCCCGTGGG CTTCGCGCTC
CTGGGCGCGC AGGGGGCGGT GGAGCTGTTC CGGCTCAAGG GATCCGATAC CGCGAGCTTG
GGGGCGACCC ACGAATGA
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| Protein sequence | MSLITSLSRY ACICGAVLMA LTGVMLTYEV VARYFFIRPT IWAAELSQLC LIWGCLLAMA
HLLTLRRHIT VNAVTGLLPP GAQKVCAGIA LVVVIVFSAI VTIYGFDIFW TSFERGRTTG
SILNLPIWIS EASVPVGFAL LGAQGAVELF RLKGSDTASL GATHE
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