Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_1003 |
Symbol | |
ID | 5710519 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | - |
Start bp | 1036698 |
End bp | 1037711 |
Gene Length | 1014 bp |
Protein Length | 337 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641266914 |
Product | aminoglycoside phosphotransferase |
Protein accession | YP_001532346 |
Protein GI | 159043552 |
COG category | [R] General function prediction only |
COG ID | [COG3173] Predicted aminoglycoside phosphotransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.083137 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCCGG AGATCGACCG CGAGGCCCTG CGGCGCTGGT GCGACGCACG GTTCGGGGTG GCGGATGCCG CGCCGGAGGT TGCCCGGATC GGCGGCGGGC AGTCGAACCC GACCTTCTAC GTCACCCATG GCGACCGGCG GCTGGTGCTG CGCAAGCAAC CGCCCGGGCC GCTGTTGAAA GGCGCCCATG CGGTGGACCG GGAATTCCGG GTGTTGCGCG CGCTTTGGGA CACGCCGGTG CCGGTGCCCG AGGCGCTGGC CTTCGAGCCG GATGCGGCGG TTCTGGGCAC GCCGTTCTAC GTGATGGCGC GGCTGGAGGG GCGGGTCTGC CCGAGCTACG CCCTGCCGGA GTTGGCGCGC GCGGATCGCG GGGCGGCGCT GCTGTCCATG GCGGAGACGC TGGCGCGGCT GCATGCGGTG AACCCGGAGG CGGTGGGCCT GGGGGATTAC GGGCGGCCCG GGGATTACTT CGCCCGGCAG ATGGCGCGCT GGTCGGCGCA ATACGACGCC TCGCCCGCGC AGGTGCCCGA CCTCGACGCC CTGCGCGACT GGCTCGCCGC GCATATGCCC GAGGATGACG GGGCGGTGGC GATTGCCCAT GGGGATTTCC GGATGGGCAA CATGATGCTG CATCCGACCG AACCGCGGGT GATCGCCGTG CTGGACTGGG AGCTGTCGAC CCTGGGCCAT CCGCTCGCCG ATCTGGGGTT TGCCTGCATG GCCTGGCATT CGGCGCCGGA GGAATATGGC GGGCTTCTGG GGCTGGACCT TGCGGCCGAG GGGCTGCCGG AGATGGACGC GTTCGTCGCC GCCTACCGCG CCGCGGCGCA GGGGGACGCG GTTTTGCGCC CGTTCCACGT GGCCTTTGCG ATGTTCCGCT TTGCGGTGAT CTTCGTGGGC ATCGCCGACC GGGCCGCGGC GGGGAGTGCG GCGGGGGCCG ATGCCGCGCG GCTCGCTCCG CTGGCGGAGG CTTTCGCGCG CCGGGGGCTT GCGGTATCGA GGCTGGACTT CTGA
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Protein sequence | MSPEIDREAL RRWCDARFGV ADAAPEVARI GGGQSNPTFY VTHGDRRLVL RKQPPGPLLK GAHAVDREFR VLRALWDTPV PVPEALAFEP DAAVLGTPFY VMARLEGRVC PSYALPELAR ADRGAALLSM AETLARLHAV NPEAVGLGDY GRPGDYFARQ MARWSAQYDA SPAQVPDLDA LRDWLAAHMP EDDGAVAIAH GDFRMGNMML HPTEPRVIAV LDWELSTLGH PLADLGFACM AWHSAPEEYG GLLGLDLAAE GLPEMDAFVA AYRAAAQGDA VLRPFHVAFA MFRFAVIFVG IADRAAAGSA AGADAARLAP LAEAFARRGL AVSRLDF
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