| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0971 |
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| Symbol | |
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| ID | 5710484 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 992438 |
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| End bp | 993442 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641266879 |
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| Product | ABC transporter related |
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| Protein accession | YP_001532314 |
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| Protein GI | 159043520 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3839] ABC-type sugar transport systems, ATPase components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.103941 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGACAAA TCAAGCTCAA CCAGGTGACG AAAAGCTTCG GCGACGTGGA GGTCATTCCG
CCTCTGGATC TGACCATCGA GGATGGCGAG TTCGCAGTGT TCGTCGGCCC CTCGGGCTGC
GGCAAGTCCA CCCTTCTTCG CCTGATCGCG GGGCTGGAGG ACATCACCTC GGGCCATATC
GAGATCGACG GCAAGGATGC GACCAATGTG CCCCCGGCCA AGCGCGGCCT GGCGATGGTG
TTCCAATCCT ACGCGCTCTA TCCGCATATG TCGGTGCGCA AGAACATCGC CTTCCCGATG
AAGATGGCGG GCATCGACGA GGCCGAGCAA CAGCGCCGGA TCGACGCCGC CGCCAAGGCG
CTGAATCTCA CAGACTATCT CGACCGCCGT CCGGGCCAGT TGTCCGGCGG CCAGCGCCAG
CGGGTGGCCA TCGGTCGCGC CATTGTCCGC GAACCAGCGG CGTTCCTCTT CGATGAGCCT
CTGTCGAACC TCGACGCGGC TCTGCGGGTG GGGATGCGGC TGGAAATCTC CGAGTTGCAC
AAGCGGCTGG AGACAACGAT GATCTACGTC ACCCACGACC AGGTCGAAGC CATGACCATG
GCCGACAAGA TCGTGGTTCT GCGCGCCGGT CATATCGAGC AGGTGGGCTC GCCGCTGGAG
CTGTACCACA GCCCCCGCAA CGAGTTCGTC GCCGGCTTCA TCGGCTCGCC CAAGATGAAC
CTCATCAAGG GGGCCGAGGC CGCAAAGCAC GGGGTCGCCA CCATCGGCAT CCGCCCCGAG
CATACGGACG TCAGCACCAC CGAGGGGCTG TGGGAAGGTC GTGTCGGGGT GGCCGAGCAT
CTCGGCTCCG ACACCTTCCT GCACATCCAC GGCGTGCCGG ATTGCGACCC GATGACCGTG
CGCGTGGATG GCGAGTTGCC GGTCAAGCAT GGCGACAAGA TCTTCCTGAC GCCGCAGCTG
GACAAGCTGC ACAAGTTCGA CGCCCAGGGC CTGCGGGTTT CCTGA
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| Protein sequence | MGQIKLNQVT KSFGDVEVIP PLDLTIEDGE FAVFVGPSGC GKSTLLRLIA GLEDITSGHI
EIDGKDATNV PPAKRGLAMV FQSYALYPHM SVRKNIAFPM KMAGIDEAEQ QRRIDAAAKA
LNLTDYLDRR PGQLSGGQRQ RVAIGRAIVR EPAAFLFDEP LSNLDAALRV GMRLEISELH
KRLETTMIYV THDQVEAMTM ADKIVVLRAG HIEQVGSPLE LYHSPRNEFV AGFIGSPKMN
LIKGAEAAKH GVATIGIRPE HTDVSTTEGL WEGRVGVAEH LGSDTFLHIH GVPDCDPMTV
RVDGELPVKH GDKIFLTPQL DKLHKFDAQG LRVS
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