Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_0893 |
Symbol | |
ID | 5710583 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | + |
Start bp | 909083 |
End bp | 910375 |
Gene Length | 1293 bp |
Protein Length | 430 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641266803 |
Product | peptidoglycan-binding domain 1 protein |
Protein accession | YP_001532239 |
Protein GI | 159043445 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.412419 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATATTC AAAGCGCGAT TTCGATCCTA TTGGCGGTAG CCCTTTTTGC GCCCTCAGCG GCAAAAGCGG GGTTTCACGA AAACCTTCTT GAACAGCTTG GCCGTGAAAT CATCGACGAG ATGTTTGAAG ACCCCCCTGC GGCGTCTCCG CCTGCGTCGC CGCCGCGCAC TGTCGAATCC CCGCAGCGGC AGGAAAATCG GCGTGTGCAG TCCGCGCTCA ACGCGTTCGG ATTCCCGGCC GGGGTGGTCG ATGGGGACCT GGGCCCGCGG TCGCGCGCGG CGATCGGGGC GTACCAGGCC TTCATGGGGT TTCCGGGCAC CGGGTTTCTG GACGAGTACC AGAAGGGTGT GCTTTTGAAC GCCCATCGCA GGTTGCAGGC CGGCGACGGT GCGGCCTTCC CGAATGTGCT GGCCGCGGAA GGGACCAAGG GGTTGCTCAA GGCGTTCACC CCGACGGTCG GGCCGAGCAC CTATCCCGAC CCGCAAGTGG CGCAAGGAGG CAGGATCGGC GCGCCCGGGG CCCCGTTCGG CGGACCAGAG GATCTGGGCG TGGTGCCGGA CCTGCCGGTT GCGGTGCCGT CCTTGCCGCA GGCCGGGCCG ACGGCCACGC GCATGTCCGA GCGGTGCGAG TTCGTGGCCC TGACGACCCG GATCAACCAG GGGCTGATCC AGGCGGATGC GATGCTGGAT GCGGACCAGG CGCTGAGCGA GCAGTTCTGC GAGGCGCGCA GTTTTGCCCT TGCGGCGGGC CAGAGCTATG CGGTGCAGAT CGGGTTCGAG GAGGCGCAAC TCGTGGAGAT CTGCACGCGG ATCTCGGCGG CGCTTGGGCC GGTGCGTGCC ATGATGGCGG GGCAGTCGGC GCAGGCGGTG CAGGCCCGGG TGGTGGAGCT CGGCGCGTCG CTTGGCATGG CGAATCTGCC GAAACTGGCG GCCTATGGCA AGCTCTGCAC GGCGCAGGGG TATCGCCTCG ATGATGCGGA GATCGCGCTG TCGGGGGCGC TGTTGTCCTT CGCGGCGGGG CAGAGGCCCC ATGCGGAGCT TCTGGCGCAC CACGCGCGGG AAGGCTTCGG GCTGGCGGCG CAGGGGGCGG CGGCGTTTTC GTGGTACGAC ATCGCCCTCG ATGCCCTGGA GCGGGGCGCG ACACCGGCCT TCCTGCCGTC GAAATCCGCC CAGCGGGTCG CGGTCATGCG GGCGGCGATC AAGTCCGGCC AGTTGCAAGC CGATACCGTC GGCGCGGTGC CCATGGTGCC CGCGTCGGGG GGCGGCATTC CGGACCTGCC CTTGCCGCAG TAG
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Protein sequence | MHIQSAISIL LAVALFAPSA AKAGFHENLL EQLGREIIDE MFEDPPAASP PASPPRTVES PQRQENRRVQ SALNAFGFPA GVVDGDLGPR SRAAIGAYQA FMGFPGTGFL DEYQKGVLLN AHRRLQAGDG AAFPNVLAAE GTKGLLKAFT PTVGPSTYPD PQVAQGGRIG APGAPFGGPE DLGVVPDLPV AVPSLPQAGP TATRMSERCE FVALTTRINQ GLIQADAMLD ADQALSEQFC EARSFALAAG QSYAVQIGFE EAQLVEICTR ISAALGPVRA MMAGQSAQAV QARVVELGAS LGMANLPKLA AYGKLCTAQG YRLDDAEIAL SGALLSFAAG QRPHAELLAH HAREGFGLAA QGAAAFSWYD IALDALERGA TPAFLPSKSA QRVAVMRAAI KSGQLQADTV GAVPMVPASG GGIPDLPLPQ
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