| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0889 |
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| Symbol | |
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| ID | 5710579 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 904311 |
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| End bp | 905474 |
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| Gene Length | 1164 bp |
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| Protein Length | 387 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641266799 |
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| Product | alanine racemase domain protein |
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| Protein accession | YP_001532235 |
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| Protein GI | 159043441 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3616] Predicted amino acid aldolase or racemase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.405491 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCAG AAACCAAATT CGCAGAGCTC GAAGTGGGCT ACAACATTCC GGCGGCCATC
GGGATGGACG AGGCGGACAT CCAGACGCCG TGCCTTGTGG TGGATCTCGA CGCGCTGGAG
CGCAACGTGG TCAAGATGGG CAACTTCGCC AAGGAAATGG GGGTGCGGCA CCGGGTGCAT
GGCAAGATGC ACAAGTCCGT GGACGTGGCC AAGCTGCAGA TGGAGCTGGG CGGCGCGTGC
GGTGTGTGCT GCCAGAAGGT GTCGGAGGCC GAGGCCTTCG CCCGTGGGGG GATCAAGGAC
GTGCTTGTGT CGAACCAGGT GCGTGACCCG GCCAAGATCG ACCGTCTGGC GCGGATTCCC
CGGCTCGGTG CGCGCGCGAT CTGCTGCGTG GACGATATCG AGAACGTGGC CGACCTGTCG
GCGGCGGCCA CCAAGCACGG CACCCAGATC GAGTGCCTGG TCGAGATCGA CTGCGGTGCG
GGACGCTGCG GCGTGACCAC CACCCCCGCC GTGGTCGAGA TCGCCAAGGC CATCGACGCG
GCCCCGGGCC TGAAATTCTC GGGCCTGCAG GCCTATCAGG GCGCGATGCA GCACCTCGAC
AGCTATGACG AGCGCAAGGC CAAGATCGAC ATCGCGGTCG CCATGGTGAA GGACGCGGTC
GATGCGCTGA AGGCCGAGGG GCTGGAGTGC GACATCGTCG GCGGCGGCGG CACGGGGTCG
TACTATTTCG AGGGCAACTC GGGCGTCTAT AACGAGCTTC AGTGCGGCTC CTACGCGTTC
ATGGATGCCG ATTACGGCCG GATCCTGGAC AAGAACGGCA ACCGGATCGA CCAGGGCGAG
TGGGAGAACG CGCTGTTCAT CCTGACCTCG GTGATGTCCC ATGCCAAGGC CGACAAGGCG
ATCTGCGATG CGGGCCTGAA GGCGCAATCG GTGGATAGCG GCCTGCCGTT CATCTATGGG
CGCGACGACG TAAAATACGT CAAATGCTCG GACGAGCATG GCGTGATCGC GGACCCGGAT
GGCAAGCTGA AGGTCAACGA CAAGCTCAAG CTGGTCCCCG GTCATTGCGA CCCGACCTGC
AACGTCCATG ACTGGTATGT GGGCGTGCGT AACGGCAAGG TCGAAGCGCT CTGGCCCGTG
ACCGCGCGCG GCCTCGCCTA CTGA
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| Protein sequence | MNAETKFAEL EVGYNIPAAI GMDEADIQTP CLVVDLDALE RNVVKMGNFA KEMGVRHRVH
GKMHKSVDVA KLQMELGGAC GVCCQKVSEA EAFARGGIKD VLVSNQVRDP AKIDRLARIP
RLGARAICCV DDIENVADLS AAATKHGTQI ECLVEIDCGA GRCGVTTTPA VVEIAKAIDA
APGLKFSGLQ AYQGAMQHLD SYDERKAKID IAVAMVKDAV DALKAEGLEC DIVGGGGTGS
YYFEGNSGVY NELQCGSYAF MDADYGRILD KNGNRIDQGE WENALFILTS VMSHAKADKA
ICDAGLKAQS VDSGLPFIYG RDDVKYVKCS DEHGVIADPD GKLKVNDKLK LVPGHCDPTC
NVHDWYVGVR NGKVEALWPV TARGLAY
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