| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0882 |
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| Symbol | |
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| ID | 5710572 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 897647 |
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| End bp | 898615 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641266792 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001532228 |
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| Protein GI | 159043434 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.838286 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGACA CGACCCCCGA CCTTCCCCCC GACACGCCCG TCGCGGTCAA GGAACCGTCA
CGCTTCTCGG TCGCCTGGCA GTCGGACTTC GCCTGGAAAT TCCGCCGCTC CCCCGTGGCG
CTGGTCTCCT TCTCGGTGGT GGTGCTGCTG GTGCTGGCGG CGCTCTTCGC GCCGCTCATC
GCGCCTTACG ACCCGTTCAA CCCGGCGTCC CTTAACCTGA TGAACGGGTT TTCCGCGCCG
ATGACCCCCA ACGCGTTCAC CGGCGACACC TTTTGGCTCG GCACGGACGA CCAGGGCCGG
GACGTGTTCT CGACCATCCT CTACGGGATG CGGATCTCGC TCTTCGTGGG CTTCGCGGCG
GTGCTCTTCG CCATGACCCT CGGCGTGACC CTGGGCCTGA TCGCGGGCTA TGTGGGCGGC
TGGGTGGAGA CGATCATCAT GCGCGTGGCC GATGTGCAGC TGACCTTCCC GGCGATCCTG
GTGGCCATGC TGATCTTCGG CATCGCCAAG GGGATCACCC CGGTCGAATA CCGCGACCAG
ATGGCGATCT GGGTGCTGAT CCTCGCCATT GGTCTCTCGG ACTGGGTGCA GTTCGCCCGC
GTGGTGCGCG GCGCGACCCT GGTCGAGAAG AACAAGGAAT ACGTGCAGGC CGCCCGCCTG
ATCGGGCGCG GCTCCGGCGC GATCATGCTG CGCCATATCC TGCCCAACGT GCTGTCGCCG
GTGCTGGTGA TCGCCACGAT CTCCTTGGCG CTCGCGATCA TCGCCGAGGC GACGCTCAGC
TTCCTCGGCG TCGGCGCCCC GCCCACGCAG CCCAGCTTGG GCACCCTGAT CCGCATCGGA
CAGGGGTTCC TCTTCTCGGG CGAGTGGTGG ATCCTGTTCT TCCCGGCGGT CACCCTGCTG
GTGCTCGCGC TCAGCGTGAA CCTGCTGGGC GACTGGCTCC GCGACGCCCT GAACCCGAGG
CTGCGATGA
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| Protein sequence | MTDTTPDLPP DTPVAVKEPS RFSVAWQSDF AWKFRRSPVA LVSFSVVVLL VLAALFAPLI
APYDPFNPAS LNLMNGFSAP MTPNAFTGDT FWLGTDDQGR DVFSTILYGM RISLFVGFAA
VLFAMTLGVT LGLIAGYVGG WVETIIMRVA DVQLTFPAIL VAMLIFGIAK GITPVEYRDQ
MAIWVLILAI GLSDWVQFAR VVRGATLVEK NKEYVQAARL IGRGSGAIML RHILPNVLSP
VLVIATISLA LAIIAEATLS FLGVGAPPTQ PSLGTLIRIG QGFLFSGEWW ILFFPAVTLL
VLALSVNLLG DWLRDALNPR LR
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