| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0860 |
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| Symbol | |
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| ID | 5710550 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 875634 |
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| End bp | 876608 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641266770 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_001532206 |
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| Protein GI | 159043412 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.18038 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.215748 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCCGGG AGACTTGGAT CAACTTCGCA ATCGCGCTCG GCCTGCTGGC CGTGCCGCTC
TGGGCCTGGG TGGCGGACGA GCCGTTCACG ATCACGCTGG CGACCCGGGT GGCGATCCTG
GCGCTGGCCG GTGTCGGGCT GAACCTGGCG CTGGGGTTGG GGGGGATGGT GAGCCTCGGG
CATGCCCTGT TTTTCGGGAT CGGGGGGTAT GCGATGGGCA TTCTCGCCCA CCACGCGCAG
ACCTTCGATC CGCTGATGGA GGCGCCCTTC GTGATCGAGG GCACGAAGTC GATGCCGGTG
ATATGGCTGA CCGCAATGGC CCTGAGCGCG CTGGCCGCGC TGGCCGTGGG CGCGCTGTCC
CTGCGCACCA CGGGGGTCTA TTTCATCATG ATCACCCTCG CCTTCGGCCA GATGTTCTAC
TACTTCGCCA TTTCCTGGCC CGCCTATGGC GGCGAGGACG GGCTGTCGAT CTATGTGCGC
AACGGCTTTC CGGGGCTGAA CACGCTCGAC CCGATCCAGT TCTTCCTGCT GTGCTACGGG
CTGCTGCTGC TGGCGCTGTT TGTCTGCGCG CGGATCACCG CGTCGCCCTT CGGTCTGGCG
CTGTCCACCG CGCGGCAGGC CCCGGCGCGG GCGGAGACGC TGGGCTTCTC GCCCTTTCGG
TTGCGGCTCA TCGCTTTCAC CATCTCCGGC GCGATCACGG GGTTGGCGGG CGCGCTCTTC
GCCGATCTCA ACCGGTTCGT CAGCCCCGCC ATGTTCAGCT GGCACACCTC GGGCGAGATC
ATGGTCTTCG TGATCCTCGG CGGGGTCGCG CGGCTCTTCG GGCCGGTGGC GGGCGCCGCG
CTCTTCATCC TGCTGGAGCA TTGGCTGGGC GGGCTGAGCG AGTACTGGCT GATCTATCTC
GGGGCGCTTC TGCTGGGCGT TGTGCTCTTC GCCAAGGGCG GGCTGGTGGG CACGCTGCTG
CGGGGGCGGG CGTGA
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| Protein sequence | MGRETWINFA IALGLLAVPL WAWVADEPFT ITLATRVAIL ALAGVGLNLA LGLGGMVSLG
HALFFGIGGY AMGILAHHAQ TFDPLMEAPF VIEGTKSMPV IWLTAMALSA LAALAVGALS
LRTTGVYFIM ITLAFGQMFY YFAISWPAYG GEDGLSIYVR NGFPGLNTLD PIQFFLLCYG
LLLLALFVCA RITASPFGLA LSTARQAPAR AETLGFSPFR LRLIAFTISG AITGLAGALF
ADLNRFVSPA MFSWHTSGEI MVFVILGGVA RLFGPVAGAA LFILLEHWLG GLSEYWLIYL
GALLLGVVLF AKGGLVGTLL RGRA
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