Gene Dshi_0848 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_0848 
Symbol 
ID5711474 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp857543 
End bp857878 
Gene Length336 bp 
Protein Length111 aa 
Translation table11 
GC content68% 
IMG OID641266757 
Productprotein of unknown function DUF952 
Protein accessionYP_001532194 
Protein GI159043400 
COG category[S] Function unknown 
COG ID[COG3502] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0194191 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.118784 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCTACA AAATACTCCG CGCGCCCGAA AACGCGGCGT TCGAGGCCGC CGGCGAAACC 
GCCGGGGCGC CCATCGATCT GGCCGACGGC TACATCCATT TCTCCACCGC CGACCAGGTG
GCCGAAACCG CCGCCAAGCA TTTCGCGGGC GAGGACGGGT TGGTTTTGCT GGCGGTGGCC
GCGGACGGGC TCGGTGACGC ACTGAAATGG GAGCCGTCGC GGGGCGGCGC GCTCTTTCCG
CATCTCTACC GGCGCTTGTT CCGGTCTGAC ATCCTCTGGT CGCGGCCCTT GCCTCTCGTG
GACGGACGGC ACGCCTTCCC GGAGCCGCTG GCATGA
 
Protein sequence
MIYKILRAPE NAAFEAAGET AGAPIDLADG YIHFSTADQV AETAAKHFAG EDGLVLLAVA 
ADGLGDALKW EPSRGGALFP HLYRRLFRSD ILWSRPLPLV DGRHAFPEPL A