| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0825 |
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| Symbol | |
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| ID | 5711451 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 830837 |
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| End bp | 832729 |
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| Gene Length | 1893 bp |
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| Protein Length | 630 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641266734 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_001532171 |
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| Protein GI | 159043377 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCTATT CTCAGACCTA TGCTGCGTGG AAAAACGACC CCGAGGGGTT CTGGATGGAG
GCCGCGCAGG CCATTGATTG GGTCACACCG CCCGGCGCGG CGCTGAACTC CGACAACGCC
CCGCTTTACG AGTGGTTCAC CGATGCCGAG GTCAACACCT GCTTCAACGC GGTGGACCGG
CATGTGCAGG CCGGGAATGG CGACCGGGTG GCGATCATCC ATGACAGCCC CGTCACCCAC
ACCAAGCAGG AAATCACCTA TGCCGAGTTG CAGGAGCGCG TATCGCTTCT GGCCGGGGCG
CTGCGCGCCA AGGGGATCGA GAAAGGTGAC CGGGTCCTGA TCTACATGCC GATGGTGCCC
CAGGCGCTGG AGGCGATGCT GGCTTGCGCG CGGCTCGGCG CGATCCACTC GGTGGTGTTC
GGCGGGTTTG CGGCCAACGA GCTGGCGGTG CGGATCGACG ATGCCACGCC CAAGGCGATC
ATCGCCGCCT CCTGCGGGAT CGAGCCCGGG CGCGTGGTCC ATTACAAGCC CCTGCTCGAC
GGCGCGATTG ACCTGGCGAC CCACAAGCCC GACTTCTGCC TGATCTTCCA GCGCGAACAG
GAGGTCGCCC ACCTGGAGCC GGGCCGCGAT TTCGACTGGC ACGAGGCGCA ATACGGCGTG
GATCCTGCCG AATGTGTGCC GGTGGCGGGC AACCACCCGG CCTATATCCT CTATACTTCG
GGCACCACCG GGCAGCCCAA GGGCGTGCTG CGCCCGACCG CGGGGCATCT CGTGGCGCTC
AACTGGACGA TGAAGAATAT CTACAACGTG GACCCGGGCG ATGTATTCTG GGCCGCCTCG
GACGTGGGCT GGGTCGTGGG GCATTCCTAT ATCTGCTACG CGCCGCTGAT CCACGGCAAC
ACCACCATCG TGTTCGAGGG CAAGCCCGTA GGCACGCCCG ACGCGGGCAC GTTCTGGCGG
GTGATATCCG AGCACAAGGT GAAAAGCTTC TTCACCGCAC CCACCGCCCT GCGCGCGGTC
AAGCGCGAGG ATCCCAACGG GGAGTTCATC GGAAAATACG ACCTGTCCCA CCTGAAAACC
GTCTATCTGG CCGGCGAACG GGCGGATCCG GACACGATCC AGTGGACCAT GGACAAGCTC
GGCGTGCCGG TGATCGACCA CTGGTGGCAG ACCGAAACCG GCTGGGCCAT TGCCGCCAAC
CCGATGGGCA TCGAACACCT GCCGGTCAAG ATCGGCAGCC CCTCAGTCGC CATGCCCGGC
TACGATGTGC AAGTGCTGGA CGAGGGCGGC CACCCGGTCG CCCCCGGCAC CCTCGGTGCC
ATCGCGGTCA AGCTGCCGCT TGCCCCCGGC ACCCTGCCGA ACCTGTGGCA GGCCGAGGAG
CGCTTCGTCA AAAGCTATCT GACCACCTTC CCGGGCTATT ACGAGACCGG GGATGCGGGC
TATATCGACG AGGACGGCTA TCTTTACATC ATGGCGCGCA CGGATGACGT GATCAACGTC
GCCGGACACC GGCTGTCCAC CGGCGCGATG GAAGAAGTGC TGGCCAGCCA TCCGGACGTG
GCGGAATGCG CGGTGATCGG CGTGTCGGAC ACCCTGAAGG GGCAGATGCC GCTGGGCTTC
CTGTGCCTGA GCGCGGGCGT GAACCGACCC CATGACGAGA TCGCCAAGGA ATGCGTCAAG
CTCGTGCGCG AGAAGATCGG CCCCGTGGCG GCCTTCAAGC TCGCCTGCGT GGTCGACCGG
CTGCCCAAGA CCCGGTCGGG CAAGATCCTG CGCGGCACCA TGGTCAACAT CGCCGACGGC
ACCCCGTGGA AGATGCCCGC GACCATCGAT GACCCGGCGA TCCTCGACGA AATCACCGAA
GCCCTGGGCA AGCTCGGCTA TCCGGCCAGC TGA
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| Protein sequence | MTYSQTYAAW KNDPEGFWME AAQAIDWVTP PGAALNSDNA PLYEWFTDAE VNTCFNAVDR
HVQAGNGDRV AIIHDSPVTH TKQEITYAEL QERVSLLAGA LRAKGIEKGD RVLIYMPMVP
QALEAMLACA RLGAIHSVVF GGFAANELAV RIDDATPKAI IAASCGIEPG RVVHYKPLLD
GAIDLATHKP DFCLIFQREQ EVAHLEPGRD FDWHEAQYGV DPAECVPVAG NHPAYILYTS
GTTGQPKGVL RPTAGHLVAL NWTMKNIYNV DPGDVFWAAS DVGWVVGHSY ICYAPLIHGN
TTIVFEGKPV GTPDAGTFWR VISEHKVKSF FTAPTALRAV KREDPNGEFI GKYDLSHLKT
VYLAGERADP DTIQWTMDKL GVPVIDHWWQ TETGWAIAAN PMGIEHLPVK IGSPSVAMPG
YDVQVLDEGG HPVAPGTLGA IAVKLPLAPG TLPNLWQAEE RFVKSYLTTF PGYYETGDAG
YIDEDGYLYI MARTDDVINV AGHRLSTGAM EEVLASHPDV AECAVIGVSD TLKGQMPLGF
LCLSAGVNRP HDEIAKECVK LVREKIGPVA AFKLACVVDR LPKTRSGKIL RGTMVNIADG
TPWKMPATID DPAILDEITE ALGKLGYPAS
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