Gene Dshi_0806 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_0806 
SymboltauZ 
ID5711242 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp814089 
End bp815120 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content68% 
IMG OID641266715 
Producthypothetical protein 
Protein accessionYP_001532152 
Protein GI159043358 
COG category[S] Function unknown 
COG ID[COG2855] Predicted membrane protein 
TIGRFAM ID[TIGR00698] conserved hypothetical integral membrane protein 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0714883 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTCACC CCCTGCGCGA CGGCGCGCTC GGCACCTACC TGTCCGAGCG CGTCCGCCCC 
CTGTTCCCGG GACTTCTAGT CGCGGTGCTG GTTGCCCTCG CGGCCCAGTT CGTGGCCGAG
CATTACGGCG CCCCGGCCAT GCTCATGGCG CTGCTCTTCG GTATCGCCCT GAATTTCCTG
TCGGAGACCG AGCGCACCGC GCCGGGCATC GGCTTCACCG CCCGCACCGT GCTGCGCTTC
GGGGTCGCCG TGCTTGGCGC GCGCATCTCG TTGGAGCTCT TCCTCGCCAT CGGTTGGGAG
ATGATCGGCC TGCTGGTCCT CGGCGTGATC CTGACGATCC TGTTCGGCGT CGTTCTGGCA
CGCTTCATAG GGCAGGGGCC CCGCTTTGCC ATCCTGACCG CGGGTGCCGT TGCCATCTGC
GGTGCGTCCG CCGCGATGGC CATCGCCGCG GTGCTGCCCA AAGACGAGAA ATCCGAGCGC
AACCTGCTCT TCACCGTGTT CGGGGTCACG CTTTTGTCGA CAATCGCCAT GGTGCTCTAC
CCGATCCTGA CGGGCGCGCT GGGGTTCGAT GACACCACCG CGGGCATCTT TATCGGCGCG
ACCGTCCATG ACGTGGCGCA GGTGGTCGGC GCGGGCTTCT CGATCTCCCA GGAAACCGGC
GAAACCTCGA CCATGGTCAA GTTGATCCGG GTGTCGCTTC TGGCGCCCGT GGTGTTGCTG
ATCGCGCTGT GGTGGCGCAG TGCCGGCGCG CCCGCCGAGG GGCCGCGCCC GCCGCTGGTG
CCGGGCTTCG TGATCGGGTT CCTGGTCCTG GCGGGGCTCA ACTCCCTCGG CCTGATCCCC
GCGGGGATCG CCGCCTGGTT GTCGAGTGTC TCAAGCTGGG CGCTGCTGTC GGCCATCGCC
GCCGTTGGGA TGAAGACCGA CATGAAGGCG ATGTTGCAGG TGGGCGGTGG TCCCATCGCA
CTGATCGTGG CGGAGACGGT GTTCCTGGCG CTGCTGATCC TCGGCGGGAT CTACCTGCTG
CGCGGGGTCT GA
 
Protein sequence
MPHPLRDGAL GTYLSERVRP LFPGLLVAVL VALAAQFVAE HYGAPAMLMA LLFGIALNFL 
SETERTAPGI GFTARTVLRF GVAVLGARIS LELFLAIGWE MIGLLVLGVI LTILFGVVLA
RFIGQGPRFA ILTAGAVAIC GASAAMAIAA VLPKDEKSER NLLFTVFGVT LLSTIAMVLY
PILTGALGFD DTTAGIFIGA TVHDVAQVVG AGFSISQETG ETSTMVKLIR VSLLAPVVLL
IALWWRSAGA PAEGPRPPLV PGFVIGFLVL AGLNSLGLIP AGIAAWLSSV SSWALLSAIA
AVGMKTDMKA MLQVGGGPIA LIVAETVFLA LLILGGIYLL RGV