| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0743 |
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| Symbol | mcsS |
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| ID | 5711178 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 750674 |
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| End bp | 752056 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641266651 |
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| Product | MscS Mechanosensitive ion channel |
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| Protein accession | YP_001532089 |
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| Protein GI | 159043295 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTTTGT CCCGTCTGCT GCCCTGCCTT GTTCTTCTGG CGCTGATCCT CGTGGATCTC
CGCCTCCCCC AGGCGGTGGC CCAGACCGCA TCCGCGCCCG CGCCCTCGGA AGAGGTGGTG
GACACAGACC AGACCGTGTC CGTGGATGCG GGCATTGCCG ATACGCAGAT CGCGCGCCGC
CTGACGGAGA TCCTCGAGAC CACCGGCTGG TATGACGACG TGACCCTGCG CGTGGAGGAC
GGCATCGTGT TCCTCGACGG CACCGTGACG ACCGAACAAC GGCGCGACTG GCTGCGCGAT
CTGGCCGCCA AGACCGACGG GGTGGTGGCC ATCGTCAACC GGCTGCAACT GGACCAGGAG
GTGCAGCTGA CCCTCGACCC GATCGAGGCC GAGATGCGCG CGCTCTGGGA CCAGGCGGTC
GCGGCGGCCC CGTCGATCCT GGCGGCGGTG CTGATCCTGC CGCTGGCGCT GCTGCTGTCG
CGCCTTGTCG GGCGACTGGC GCGCTGGATG CTGCGCGGGC GCGTGCGCTC GCCCTTTCTC
GGCGATGTGC TCGCCCGCCT GATCGCGCTG CCGGTCTTCC TGATCGGGGT CTACGTGGTG
CTCCAGGTGG CGGGCCTGAC CCAGCTGGCG CTGTCGCTGA TCGGCGGCGC GGGGATCGTG
GGCATCGTCA TCGGGTTCGC CTTCCGCGAC ATCGCCGAGA ACTTCCTCGC CTCGCTGCTG
CTGTCGATCC GCCAGCCCTT CCACCGCAAC GACGTTGTCC GCGTGGGCGA GCATCTGGGC
GTGGTGCATT CGATGAACAC GCGCTCCACC GTGCTGGTCT CGCCCGAGGG CAACCATATC
CAGATCCCCA ATGCGCAGGT CTTCAAGACC ACCATCGAAA ACTACACCAC CAGCGCCTCC
CGGCGGGAGA CCTTCACCGT GGGCGTGGGC TACGACGTGC CGATCTCGGA GGTGCAGGAC
ATCATTCTGG AGGTGCTGCG CGGGCACGAG GCGGTGGTGC AGGACCCCGA GCCGATGGTC
CTGGCCGACA GCCTGGGGGC GGCGACGGTC AATGTCATGG TCTATTTCTG GTTCGACGGG
GCGCGGGTCT CGCCGATCAA GCTGCGCTCG GCCCTGATCC GCCGGGTCAA GCAGGCGCTG
ACCGAGGCCG GCGTGTCCAT GCCCGACGAG GCCCGCGAGG TGATCTTCCC GCAAGGCATT
CCGATCCACC AGGCCGACGC GCCCCCCACC GCCGCCCCCG CCCCGCCGCG CCCGGCCCCC
GCGGCGCGGG AGACCGACGT GTCGGAGGCC GAAGGCGATC TGCAAACCGA CCTCGTGGAC
CTTGACGCCC AGATGGCGGC GGAGGTCGAA GGCAGCGGCG AAGAGAACCT GCTGCGCGGC
TGA
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| Protein sequence | MRLSRLLPCL VLLALILVDL RLPQAVAQTA SAPAPSEEVV DTDQTVSVDA GIADTQIARR
LTEILETTGW YDDVTLRVED GIVFLDGTVT TEQRRDWLRD LAAKTDGVVA IVNRLQLDQE
VQLTLDPIEA EMRALWDQAV AAAPSILAAV LILPLALLLS RLVGRLARWM LRGRVRSPFL
GDVLARLIAL PVFLIGVYVV LQVAGLTQLA LSLIGGAGIV GIVIGFAFRD IAENFLASLL
LSIRQPFHRN DVVRVGEHLG VVHSMNTRST VLVSPEGNHI QIPNAQVFKT TIENYTTSAS
RRETFTVGVG YDVPISEVQD IILEVLRGHE AVVQDPEPMV LADSLGAATV NVMVYFWFDG
ARVSPIKLRS ALIRRVKQAL TEAGVSMPDE AREVIFPQGI PIHQADAPPT AAPAPPRPAP
AARETDVSEA EGDLQTDLVD LDAQMAAEVE GSGEENLLRG
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