Gene Dshi_0636 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_0636 
Symbol 
ID5712095 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp635809 
End bp636474 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content72% 
IMG OID641266544 
Productphospholipase/Carboxylesterase 
Protein accessionYP_001531983 
Protein GI159043189 
COG category[R] General function prediction only 
COG ID[COG0400] Predicted esterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.235231 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCGC GGCTGGTGCG GGGCGGGGCG CCTGCGTCCC GCGCCCCGGC GGGCCTCGTC 
CTTGTCCATG GACGGGGCGG GTCCGCCGCC GACATCCTGC AGGTTGGGGA GGCCCTGGGC
CTTCCCGATC TTGCGCTGAT CGGGCCGGAG CATCCGGCCC GGTCCTGGTG GCCAACCTCG
TTCCTGGCGC CCCATGCCGA GATGGCCGCG CCTTTGGAGG CCGGACTGGA TGCCGTTGCG
GATGCCTTCG CGGCACTGGA GGCCGAGGGC CTGCCCCGCG CACGGATCGC CGTGGCCGGG
TTCAGCCAGG GCGCGTGCCT TGCGCTGGAA TATGCGGCGC GGCAGGGCAC GGGGCTGGCC
GGGGCGTTTG GGTTTTCAGG CGCGCTGGTG GGCACCGGGG ACACGGACGG CGCGCCGACG
CCCGCACTTT ATGGGCATGG CGACAAGCGG TTCGACTATG ACACCGACCT GCGCGGGCTG
CCCGTCTACC TGAGTGTCTA TGAACAGGAC CCGCATATCC CGCACGCCCG GGCACAAAGA
TCGGCGGAGG TGTTTAGACG CCTCGAGGCG ACCGTCGACA CGGTGACCGC GCCGGGGGCG
GGGCATGGGC TGCTGTCCGA GGACATCACC GCCCTGCGCG GCCTTCTGAA CCGCCCTGCC
GCCTGA
 
Protein sequence
MTARLVRGGA PASRAPAGLV LVHGRGGSAA DILQVGEALG LPDLALIGPE HPARSWWPTS 
FLAPHAEMAA PLEAGLDAVA DAFAALEAEG LPRARIAVAG FSQGACLALE YAARQGTGLA
GAFGFSGALV GTGDTDGAPT PALYGHGDKR FDYDTDLRGL PVYLSVYEQD PHIPHARAQR
SAEVFRRLEA TVDTVTAPGA GHGLLSEDIT ALRGLLNRPA A