Gene Dshi_0592 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_0592 
SymbolftsI1 
ID5712046 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp582397 
End bp584340 
Gene Length1944 bp 
Protein Length647 aa 
Translation table11 
GC content66% 
IMG OID641266495 
Productdivision-specific transpeptidase 
Protein accessionYP_001531939 
Protein GI159043145 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0768] Cell division protein FtsI/penicillin-binding protein 2 
TIGRFAM ID[TIGR03423] penicillin-binding protein 2 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGGG CCGACAAGGA CATGAAGCTC AGCGCGCGCA CGATCACCCG CCGGGGGCTG 
ATTGTCGGCG GGCTGCAACT GGGCGTTCTG GGTGCCCTCG CGGTTCGCAT GCGCGAGTTG
CAGGTGAAGG AAGCCGAACA GTACAAATTC CTGGCCGAAG AGAACCGGAT CAATATCCGC
CTTCTGCCCC CGGCGCGTGG GCTTATCTAT GACCGTGACG GGGTTCTGCT GGCGGGCAAT
GCGCCGAATT ACCGGGTCGT GATCGTGCGC GAGGACGCAG GCGACGTGGA TGCGGTCCTG
AGAACACTGA CGGATATCGT CCCGCTTCCC GAAGAGGACC TGGCGCGCGC GCGGCGGGAA
ATGGGCCGTC GGTCGCCGTT TGTGCCGGTG ACGATTTCCG ACCGGCTGAC ATGGGAGCAA
TTCTCCGAGA TCAGCATCAA CGCCCCGGCC CTGCCCGGCA TCGTGACCGA GGTGGGGCTG
TCGCGCTACT ATCCGCTGGA CCAGGATTTC GCCCATTCCA TCGGCTATGT CGGCCCAGTC
AGCGATTTCG ATCTCGAACG GCTCAACGAT GACGATCCGC TGTTGCAGAT CCCCCGCTTC
CAGATCGGCA AGACCGGGGT GGAGGCCAAG TTCGAACAGG CGCTACGCGG CTCGGCCGGC
AGCAGCCAGA TCGAGGTGAA CGCCGCGGGC CGGGTGATGC GAGAATTGCG CCGGGACGAG
GGTCAACCGG GCGCCAATCT GCAACTCACA CTCGACCACG CGCTGCAGAA CTACACCGAA
GCCCGACTGG CCGGGGAAAG CGCGGCCGTG GTGGTGATGG ATATCGAGGA TGGCGATATC
CGCGCCATCG CCTCGGCACC CAGTTTCGAT CCGAACAAGT TCGTACGGGG GATATCCAGC
GCCGATTACA GAGCCCTGCT GGAGGATGAA TACCGTCCCC TGGCCGACAA GACGGTGCAG
GGCACCTATC CACCCGGTTC GACTTTCAAG ATGTTGACGG CGCTGGCCGC GCTGGAAGCA
GGGGTGATCG ACCCGGGCGA GCGGGTCTGG TGCCCCGGGC ATTACAAGCT GGGCACGCGC
CGATTCCATT GCTGGAAACG CGGCGGCCAT GGCTGGATGA ACCTGGTCGA CAGCCTGCGG
GAGAGCTGCG ACGTCTATTA CTATGACATC AGCCAGAAGG TCGGCGTCGA CAAGATCGCC
GAGATGGCGC GCCGCTTTGG CCTCGGCACC CGGTTCGATG TGCCCATGTC GGCGGTGGCC
GAGGGCCTGA TGCCCAACCG CGCCTGGAAG GCCGCGAACC GGGGCGAGGC GTGGCAGGTG
GGCGATACGC TGAATGCGTC CATCGGGCAG GGTTTCGTTC TTGCCTCACC GCTGCAACTG
GCCGTGATGA CAGCGCGGCT CGCAACCGGG CGCGAGATCA TGCCGCGCCT GATCCGGGCT
GTGAACGACC GGCCCGTGGC ACGGCCCGAC CCCGCGCCAC TCGGCATTCG CCGCGCGCAT
CTGGAGGTGA TCCAGCGCGC GCTCTACGAG GTGACGAACC TGCGCAGCGG TACGGCCTAT
GGCTCGCGCA TCGCGGAGAG CACCTATCGG CTCGCCGGAA AGACTGGCAC CAGCCAGGTC
CGCAACATCA CCGTCGAAGA ACGCGCCCGC GGCGTGTTTC GCAACGAAGA CCTGCCGTGG
AACCGGCGCG ATCATGCCTT GTTCGTGGGC TATGCCCCCT TCGATGCCCC GCGCTATGCC
GTCTCGGTCG TTGTCGAGCA TGGCGGCGGT GGCTCCAAGG CCGCGGCCCC GATCGCGCGG
GACGTCCTGC TACAGGCGCT TTATGGCGGC CTGCCCCCGC TCAGCGCCTA TCCCGCCCAT
CAGCGCAACA TGATCGACGA GCGGCAACGC GCACTGGAGT TGCGCCCGCG CCAGGAGCCC
GAGCAGGGCC GCAGCCGCGC ATGA
 
Protein sequence
MKRADKDMKL SARTITRRGL IVGGLQLGVL GALAVRMREL QVKEAEQYKF LAEENRINIR 
LLPPARGLIY DRDGVLLAGN APNYRVVIVR EDAGDVDAVL RTLTDIVPLP EEDLARARRE
MGRRSPFVPV TISDRLTWEQ FSEISINAPA LPGIVTEVGL SRYYPLDQDF AHSIGYVGPV
SDFDLERLND DDPLLQIPRF QIGKTGVEAK FEQALRGSAG SSQIEVNAAG RVMRELRRDE
GQPGANLQLT LDHALQNYTE ARLAGESAAV VVMDIEDGDI RAIASAPSFD PNKFVRGISS
ADYRALLEDE YRPLADKTVQ GTYPPGSTFK MLTALAALEA GVIDPGERVW CPGHYKLGTR
RFHCWKRGGH GWMNLVDSLR ESCDVYYYDI SQKVGVDKIA EMARRFGLGT RFDVPMSAVA
EGLMPNRAWK AANRGEAWQV GDTLNASIGQ GFVLASPLQL AVMTARLATG REIMPRLIRA
VNDRPVARPD PAPLGIRRAH LEVIQRALYE VTNLRSGTAY GSRIAESTYR LAGKTGTSQV
RNITVEERAR GVFRNEDLPW NRRDHALFVG YAPFDAPRYA VSVVVEHGGG GSKAAAPIAR
DVLLQALYGG LPPLSAYPAH QRNMIDERQR ALELRPRQEP EQGRSRA