| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0578 |
|---|
| Symbol | rDP |
|---|
| ID | 5712031 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dinoroseobacter shibae DFL 12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009952 |
|---|
| Strand | + |
|---|
| Start bp | 568174 |
|---|
| End bp | 569184 |
|---|
| Gene Length | 1011 bp |
|---|
| Protein Length | 336 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641266480 |
|---|
| Product | peptidase M19 renal dipeptidase |
|---|
| Protein accession | YP_001531925 |
|---|
| Protein GI | 159043131 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2355] Zn-dependent dipeptidase, microsomal dipeptidase homolog |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCTATC TGATTGACGG TCTGCAATAC GCCAACTGGT CGGAGAAGAT CTTTCGCCAG
ATGCGCGCGG GTGGCGTGGA TGCGGTCCAT GTGACGATCA CCTACCACGA GACGTTTCGA
GAAACCGTGC TGGTGATCGA GCAGTGGAAC CGTTGGTTTG AACAGTTCCC CGACCTGATC
TTTCAGGGGC GCACCGCAGA CGATGTGTGC CGCGCGCGAG AGACGGGCCG CACCGCGATC
TTCTTCGGCT CCCAAAACCC GTCCTGCATC GAGGACGACA TCGGTCTGGT CGAGGTTCTG
CACACGCTGG GCCTGCGGTT CATGCAGCTT ACCTACAACA ACCAGTCGCT TCTGGCGTCG
GGCTGTTACG AGGACGAGGA TACCGGGCTG ACCCGGATGG GGCGTCAGGT CGTCGCGGAA
ATGAACCGCG TGGGCCTGGT GGTGGACATG AGCCATTCCG GCGAGCGGTC GACCTTCGAG
GCGATTGCGC AGTCCACGCG GCCCGTCACG ATCAGCCATG CCAACCCGGC AAGCTGGCAC
AAAGCCCGGC GCAACAAGTC CGACGACCTG CTGCGGGCAC TTGGGCAAAG CGGCGGGTTC
TTGGGGCTGT CGGTCTATCC GCATCACCTC AAGGATGGGG GCGATTGCAC GCTGCAATCG
TGGTGCGACA TGGCTGCCTT GGCCGTGGAT CTGATGGGTC CGCAGAATGT CGGTATCGGC
ACGGACCTGT GCCAGGACCA GCCCGACAGC ATCGTGGAAT GGATGCGTGT GGGCCGCTGG
ACCAAGGCCA TCGACTACGG CGAGGGCAGC GCGGCCAATG CGGGTTTCCC GTCGATGCCC
AACTGGTTCC GCGACAACCG CGATCTGGCG GGCATTCGGG CGGGCCTGCG CGCCGCCGGA
CTGGATGAGG CCACCACGGA CGGGATCATG GGCGACAACT GGCACGCCTT TTTCGCGCGC
AGTTTCGGGC GTCAGGACGC CCCCACGACC AAACAAGACG CCGCCGAATA G
|
|---|
| Protein sequence | MSYLIDGLQY ANWSEKIFRQ MRAGGVDAVH VTITYHETFR ETVLVIEQWN RWFEQFPDLI
FQGRTADDVC RARETGRTAI FFGSQNPSCI EDDIGLVEVL HTLGLRFMQL TYNNQSLLAS
GCYEDEDTGL TRMGRQVVAE MNRVGLVVDM SHSGERSTFE AIAQSTRPVT ISHANPASWH
KARRNKSDDL LRALGQSGGF LGLSVYPHHL KDGGDCTLQS WCDMAALAVD LMGPQNVGIG
TDLCQDQPDS IVEWMRVGRW TKAIDYGEGS AANAGFPSMP NWFRDNRDLA GIRAGLRAAG
LDEATTDGIM GDNWHAFFAR SFGRQDAPTT KQDAAE
|
|---|
| |