| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0549 |
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| Symbol | ugpE4 |
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| ID | 5712002 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 536359 |
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| End bp | 537177 |
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| Gene Length | 819 bp |
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| Protein Length | 272 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 641266451 |
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| Product | ABC-type sugar / sn-glycerol-3-phosphate transport system permease protein ugpE |
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| Protein accession | YP_001531896 |
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| Protein GI | 159043102 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0395] ABC-type sugar transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACATCGA CCCGCTCCCT CTTTTCGCAG ATCGCGCTAC TGGTGTTGAT CATCACCGTA
TGCGTGTTTC CGTTCTACTG GATGGTCACG ACCTCCCTGA AAACCCAGAT TGTCGCCCTG
GAAGCCCCGC CCGTCTGGAT CTTCGAGCCG ACGCTGAGCA ACTACCGCGA AGCGCTGTTC
GAAGACGGCG TTCTGCGCAC GTTGATCAAC TCGTTGATCA TCGCAATCAG CACGACGTTT
CTTGCGCTCG TCCTTGGCGT GCCCGCGGCC TTTGCTCTGG CGCGGTTCGA GTTTCGCGGC
AAGAAGGACT TGTGGTTCTG GTTCATCACC AACCGGATGA TTTCGCCCAT CGTTCTTGCG
CTGCCATTCT TCCTGATCGC GCGGAACCTC GGGCTTCTGG ACAAGCATAT CACGCTGATC
CTGATCTACC TCACCTTCAA CCTGCCAATC GTGATTTGGA TCGTCACGGA CCAGTTTCGC
GGGATACCCT ATGATCTGGA CGAAGCCGCC CGACTGGAAG GGGCGAGCCA GTTCACAATC
ATGCGGAAGA TTTGCCTGCC TTTGGCCATG CCGGGTGTGG CGGTATCCGC GATTTTTTCG
TTCATCTTCT CGTGGAACGA GTTGATGTTC GGGCTGATCC TGACCCGCTC GGAGGCAAAG
ACAGCCCCGG CCATGGCTGT GTCGTTCATG GAGGGCTATA ATCTGCCCTA TGGAAAGATC
ATGGCGACTT CCACCTTGAT CGTCATCCCG GTGCTGATCT TCGCGCTGAT CGCATCCAAG
CAACTTGTCC GCGGATTGAC GATGGGAGCG GTCAAATGA
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| Protein sequence | MTSTRSLFSQ IALLVLIITV CVFPFYWMVT TSLKTQIVAL EAPPVWIFEP TLSNYREALF
EDGVLRTLIN SLIIAISTTF LALVLGVPAA FALARFEFRG KKDLWFWFIT NRMISPIVLA
LPFFLIARNL GLLDKHITLI LIYLTFNLPI VIWIVTDQFR GIPYDLDEAA RLEGASQFTI
MRKICLPLAM PGVAVSAIFS FIFSWNELMF GLILTRSEAK TAPAMAVSFM EGYNLPYGKI
MATSTLIVIP VLIFALIASK QLVRGLTMGA VK
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