Gene Dshi_0520 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_0520 
SymbolmtnK 
ID5711973 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp504830 
End bp506089 
Gene Length1260 bp 
Protein Length419 aa 
Translation table11 
GC content61% 
IMG OID641266422 
Productmethylthioribose kinase 
Protein accessionYP_001531867 
Protein GI159043073 
COG category[R] General function prediction only 
COG ID[COG4857] Predicted kinase 
TIGRFAM ID[TIGR01767] 5-methylthioribose kinase 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGCAG GCACGGCGTA TGAAGCTTTA ACCGTGGAGA CACTGCCAGA GCGGCTCCGG 
GGCGTCTCGG CGCTCGCGTC CCGTGTGGGA AATGATCCGG GGGCTTGGCA GGTGGAAGAG
GTCGGAGATG GCAATCTCAA CCTCGTTTTC ATCGTCAGTG GCCCCAGCGG AAAAGTGATC
GTCAAGCAGG CGCTGCCCTA TGTCCGTCTG GTTGGGGACA GTTGGCCGTT GCCTCTCTAT
CGCGCTTATT TCGAGTATCA CGCGCTGACG CGGCAGGCCG CACGCGACCC GGGCGCGGTG
CCGACGGTGT ACCATTTCGA CGAGGCGCAG GCGCTGATCA TCATGGAATA CCTGTCCCCC
CATGTGATCT TGCGGCGCAA GCTGATCGCC GGGGAGCATG TCGCGGGGCT GGCCGCGTTT
CTGGGCCGGT TTTGTGCCCG AACAGCGTTT CGTGGATCCG AGCTGTCGAT GCCGAGCCCC
GAAAAGAAGG CTGATGTCGC CCTGTTTGCA GGGAATGTGG AGATCCCAGC CATCACAGAG
GCTCTGGTCT TTACCGACCC GTATTTCGAT GCCGAGATGA ACAGTCACAC TGAAGGACTT
GAACCGGTCA TCGCCAGGTT GCGCGCCGAT GTCGGCTTGA AGGTCAAGGT GCAGCAAGCG
CTGCAACGCT TCGTGTCGAA CACCGAAACG ATGGTCCATG GCGACCTGCA TTCCGGCTCG
ATCATGTCCA CCGACAGCGA TAGCCGCGTG ATTGACCCGG AGTTTGTACA ATACGGGCCG
CTCGGCTTCG ATATCGGGAT GCTCTGCGCC AACTTCCTGA TGGCCTATTT CAGCCAGCCC
GCCCATCGCG GTGAAGACCT TGCGACCTAT CAAGAGTGGA TCCTCAGCGT GATTGCGGAC
ACCTGTTCCG TCTTTGAAGC CGAGTTCCGC GATCTGTGGC GCAGCGAGCG GACAGGCATA
CTCTATCCCC AAACCTTGTT CGAGGATCAG GGGCAGGACA GCACTCCGGC CTGTGATGCC
GTTTTGGCAG AGATTTGGCG CGATGCCTGG GCGGTGTGCG GGATCGAGAT GCATCGACGG
TGCCTCTCGC TGGCGCATAA TGCCGATTTC GAGGACATCG CGGATGTGCG GGTGCGCGCA
CCGCTGGAGG CGCGCAATCT GCTGATGGGG GCCGAGTTGA TCCATTCGGC CGCAACGCTT
GCCGATGCAA AGGCCGTCTG CGCCCTTGCG CGGGACTTCA ATAGAAAGGA CGTCCTATGA
 
Protein sequence
MGAGTAYEAL TVETLPERLR GVSALASRVG NDPGAWQVEE VGDGNLNLVF IVSGPSGKVI 
VKQALPYVRL VGDSWPLPLY RAYFEYHALT RQAARDPGAV PTVYHFDEAQ ALIIMEYLSP
HVILRRKLIA GEHVAGLAAF LGRFCARTAF RGSELSMPSP EKKADVALFA GNVEIPAITE
ALVFTDPYFD AEMNSHTEGL EPVIARLRAD VGLKVKVQQA LQRFVSNTET MVHGDLHSGS
IMSTDSDSRV IDPEFVQYGP LGFDIGMLCA NFLMAYFSQP AHRGEDLATY QEWILSVIAD
TCSVFEAEFR DLWRSERTGI LYPQTLFEDQ GQDSTPACDA VLAEIWRDAW AVCGIEMHRR
CLSLAHNADF EDIADVRVRA PLEARNLLMG AELIHSAATL ADAKAVCALA RDFNRKDVL