Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_0518 |
Symbol | araH1 |
ID | 5711433 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | - |
Start bp | 502175 |
End bp | 503185 |
Gene Length | 1011 bp |
Protein Length | 336 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641266420 |
Product | ribose/xylose/arabinose/galactoside ABC-type transport system protein |
Protein accession | YP_001531865 |
Protein GI | 159043071 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGACC GACTTCTCGA CATCGCCATT CGCTATGGCT TCCTGATGCT CCTGTTCGGG TTGATCGTGT ATTTCAGTCT CGCCGCGCCG GGCTTCCTCG GGCCTTTGTC GGCGGCCTTC GTGCTGCAAT CCGTGGCGAT CACCGGTATT CTTGCCCTTG GGGTGACCTG CACCCTGGTG GTCGGCGGAT TTGACTTGTC AATCGGCGCG GTGGCGACAT CGGCGCTGAT GCTGTCGGCC TATTCCATGG TGATCCTCGA ACACCCGGCA ATCGTCGCGG TTCTGTTATG CCTCGCGATG GGGGCCCTGG TCGGGTTCAT CAACGGATTG CTGATCGTGA AATTCCGGGT GCCCGATCTG CTGGCGACGC TGGGCATGAT GTTTCTGCTG ATCGGTCTGC AACGCATTCC GACCCAGGGT AATTCCATCG CTACGGGGAT GACCCTGTCC GATGGTACCG TGGCCGAGGG CACCTTTTCG GCGGCCTTCC TCTGGCTGGG GCGTCACCGG TTCGATGTGG TTATCGAGCG CCTGCTGCCG ATGCCGGTGG TGATCTTTGT CGGGATCGCC GTTTTGATCT GGCTGTTTCT GGGCTTCACC CGGCATGGAC GATTGATGTA CGCCATCGGG TCCAATGAAC GCGCCGCCGG TCTCGTCGGC ACCCCGGTCA ACCGCTACAA GATCGCGGCC TACATGATCT CGGGCGTAAC CGCGTCCATC GGGGGTATCC TGCTGGCTGC CCGTCTGGGA CGGGGCGACA TTGCCAGCGG CAACAACCTG CTGCTCGATT CCGTGGCGGC CGCGTTGATA GGGTTCGCGG TTCTGGGCGC AGCCCGACCC AACGCTTTCG GCACCGCCAT GGGCGCGCTT TTCGTGGGCA TCCTGCTGCA GGGTATGACG ATGATGAACG CGCCCTACTA CACGCAGGAT TTCGTCAAGG GCGCGGTCCT GGTCGCCGCC CTTGTCTTCA CTTTCTACCT GTCCTCGCGC CGCAGCGGCC CGGGGCATTG A
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Protein sequence | MNDRLLDIAI RYGFLMLLFG LIVYFSLAAP GFLGPLSAAF VLQSVAITGI LALGVTCTLV VGGFDLSIGA VATSALMLSA YSMVILEHPA IVAVLLCLAM GALVGFINGL LIVKFRVPDL LATLGMMFLL IGLQRIPTQG NSIATGMTLS DGTVAEGTFS AAFLWLGRHR FDVVIERLLP MPVVIFVGIA VLIWLFLGFT RHGRLMYAIG SNERAAGLVG TPVNRYKIAA YMISGVTASI GGILLAARLG RGDIASGNNL LLDSVAAALI GFAVLGAARP NAFGTAMGAL FVGILLQGMT MMNAPYYTQD FVKGAVLVAA LVFTFYLSSR RSGPGH
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