Gene Dshi_0462 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_0462 
Symbol 
ID5711378 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp447787 
End bp448983 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content61% 
IMG OID641266366 
Producthypothetical protein 
Protein accessionYP_001531811 
Protein GI159043017 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTGGC TCCTTGCGTG TCTTTTAATG CTGCCGGGCC TCGCACTGGC ACAATCCAGC 
GAGGTGCTGC CGGGGGAGCT GGAGATCTCG GTTGAAATCG AGGAGACGGA ACACACTCCG
ATGGTGCGAG AGATGGTTCT AATTACGCTC AGAGGCATCT ATCGGCGGCA CATCACGCGT
GAAGAGATGG TACAGCCCGA CCTTGAAGGG TTCAGTTGGA CCCAGCTTGG GACAGACACC
TGGCGAGAGG AGCGGTTGAA CGGAGCGAGG GTCAAAACCT TCACCCGTCG CATGGCGATT
TACCCCGACC GGGCGGGTAC GCTGACCATC GGATCCTTTA CCCACAAGCT GACCCTGACG
AATGAGGCGG ACGAGTGGTT CGAACACAGG ATCGAAACCG CCCCCGTGAG CCTCGACGTG
GCGCCGGCAT CGGCTGGTCA AGGCCCGGAG TGGTGGTTTC CCGTCAAGAA ACTGGAGATT
TCGGACACTT GGTCGAACGC ACCGGATCAG CTCGCTCCGG GGGAGGGGGT CTTGCGCATC
GTGCGGGTTG AAGCGCTTGG GGCGACCCCC GAGATGCTTC CGCCCATGCC GGAACTGACT
TCGCCTTCGG CCATGATCTT TCCGCACCCG GAAAAGCGCT TTGTCGAGCT TTCGCCCTTT
GGGCCGATCT CCTACGCTTT CTGGCGCTGG ACGATCCAGC CCGGCAATGA CACCTCGACC
ATCGTGGAAC CTTTGACCTT TCGGTATTTC GATACGGTCA CCCGCGAGGA CCGCAAGGTC
ACCATTTCAG CGCAGCGCGT GGCTTATGGT ACGGTGACGC CCGAGGCCTC GGGGAACCAG
CAAGTGCCTG TCTCACGGGT ACAGGCCCAT TTGCCGGGAT GGCCCATGGG GCTTCTTGCG
CTTTTGGTTT TTCTTGGCGG ATCGTGGTTG GCCGTCTGGG GCAGGCAGTT CGCGGGTCTG
TCGGGTATTC ATCGCTTCGC GCTGTTCGAT CCCCTGTCCC GAGAGTTGCG CCGTGCAGCC
CGCGCCGGTG AACTTGCCGA AACCCGTCGC TGCGCACGCA AGATGCTGGC GCGCGACGGG
GTAACACCGG CGCGCGCGGC AATGCTCCGC CAGTTTGACG AAGCTGCGTT CGATCCTGAG
GCGGATTCGT TGGACCTGCA GAAGTTCGTT CGATCCTTTG TCGCGGCGAA ATCGTGA
 
Protein sequence
MKWLLACLLM LPGLALAQSS EVLPGELEIS VEIEETEHTP MVREMVLITL RGIYRRHITR 
EEMVQPDLEG FSWTQLGTDT WREERLNGAR VKTFTRRMAI YPDRAGTLTI GSFTHKLTLT
NEADEWFEHR IETAPVSLDV APASAGQGPE WWFPVKKLEI SDTWSNAPDQ LAPGEGVLRI
VRVEALGATP EMLPPMPELT SPSAMIFPHP EKRFVELSPF GPISYAFWRW TIQPGNDTST
IVEPLTFRYF DTVTREDRKV TISAQRVAYG TVTPEASGNQ QVPVSRVQAH LPGWPMGLLA
LLVFLGGSWL AVWGRQFAGL SGIHRFALFD PLSRELRRAA RAGELAETRR CARKMLARDG
VTPARAAMLR QFDEAAFDPE ADSLDLQKFV RSFVAAKS