Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_0435 |
Symbol | atpD1 |
ID | 5711351 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | + |
Start bp | 427117 |
End bp | 428505 |
Gene Length | 1389 bp |
Protein Length | 462 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641266339 |
Product | F0F1 ATP synthase subunit beta |
Protein accession | YP_001531784 |
Protein GI | 159042990 |
COG category | [C] Energy production and conversion |
COG ID | [COG0055] F0F1-type ATP synthase, beta subunit |
TIGRFAM ID | [TIGR01039] ATP synthase, F1 beta subunit [TIGR03305] alternate F1F0 ATPase, F1 subunit beta |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.575594 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGGCCG ATCCCGAGGT CCACTTCGAA GGGACCATCG TCGCCATTCG CGGCGGTGTC GTGGACGTTG CGTTCGCCGA AGCGGTGCCG CGCATCCACG CGCTGATCGT GGCGGGCGGC GTGGCGATGG AGGTGGCCTC CATCGTCGGC GAGGGGGTGG TGCGCTGCAT CGCCCTCGGC CCGACCCGCG GCCTGGGTCT CGGTACCCGT GCCACGGGCA CGCGCGCGGG CATCGAGGTG CCGGTGGGCG AGGGGGTGCT GGGACGGATG CTGGATATGT TCGGCGCGCC GCTCGACGGT GCGCCGCCGC CCGAGGCCAC GGCCCGGCGC CCGATCCACC GCCCGCCGCC GGTCCTGTCG GACCGGGTGC TGCGCGCCGA GGTCCTGGAG ACCGGGATCA AGGCCATCGA CCTGCTGTCG CCCATCGAAC GGGGCGGCAA GACGGGCCTG TTCGGTGGCG CGGGCGTGGG CAAGACCGTT CTCCTGAGCG AGCTGATCCA CAACACGGTG GAGCATCACC ACGGCGTCAG CCTGTTCTGC GGGATCGGGG AGCGGTCCCG CGAGGCCGAG GAATTGTGGC GCGAGATGGG CGAGGCCGGG GTGCGCGAGC GCATGGTGAT GCTGTTCGGC CAGATGAACG AGGCGCCGGG CGTGCGGTTC CTGGTGGGTC ATTCGGCGCT GACCATGGCC GAATATTTCC GCGACGACCG CGAACAGGAT GTGCTGTTGC TGATCGACAA CATCTTCCGC TTCGTGCAGG CGGGCTCGGA GGTGTCGGGC CTGCTCGGCC GGATGCCGAG CCGCGTGGGC TATCAGCCGA CCCTGGCGAC GGAGCTGGCC GCGCTGCAGG AGCGCATCGC CTCGACCCGG CGCGGTGCGA TCACGTCGAT CCAGGCGGTT TACGTTCCGG CGGACGATTT CACCGACCCG GCGGCGGCGC ATATCTTTTC GCATCTGTCG GCCTCGGTCG TGTTGTCGCG CAAGAGGGCG TCCGAGGGGC TTTATCCGGC GGTCGATCCG CTGGCCTCGA CCTCTGTCAT GCTGACGCCC GAGGTCGTGG GACAGCGCCA TTACGACATC GCGCGCGGCG TGCGCCGGAC CTTGGCGGAG TACGAGGACC TGCGCGACAT CATCGCGATG CTGGGGATCG AGGAGTTGTC GGCCCATGAC CGGGCCGTGG TCGCCCGCGC GCGGCGGCTG GAGCGCTTTC TGACCCAGCC GTTCTTCACG GTGGGGGCAG CGGCGGGCAC CCTGGGCAAG CTGGTACCGA TCGCCGAGAC CCTGGACGGC TGCGAGGAGA TCCTGTCGCA GACCAGCTTC GAGCGGCCCG AGAGCGCCTA TTACATGATC GGCGCGCTGA GCGATCTGCG AAAGGAGGCC GCCGCATGA
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Protein sequence | MPADPEVHFE GTIVAIRGGV VDVAFAEAVP RIHALIVAGG VAMEVASIVG EGVVRCIALG PTRGLGLGTR ATGTRAGIEV PVGEGVLGRM LDMFGAPLDG APPPEATARR PIHRPPPVLS DRVLRAEVLE TGIKAIDLLS PIERGGKTGL FGGAGVGKTV LLSELIHNTV EHHHGVSLFC GIGERSREAE ELWREMGEAG VRERMVMLFG QMNEAPGVRF LVGHSALTMA EYFRDDREQD VLLLIDNIFR FVQAGSEVSG LLGRMPSRVG YQPTLATELA ALQERIASTR RGAITSIQAV YVPADDFTDP AAAHIFSHLS ASVVLSRKRA SEGLYPAVDP LASTSVMLTP EVVGQRHYDI ARGVRRTLAE YEDLRDIIAM LGIEELSAHD RAVVARARRL ERFLTQPFFT VGAAAGTLGK LVPIAETLDG CEEILSQTSF ERPESAYYMI GALSDLRKEA AA
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