| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0344 |
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| Symbol | rimM |
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| ID | 5711253 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 331421 |
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| End bp | 331921 |
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| Gene Length | 501 bp |
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| Protein Length | 166 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641266242 |
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| Product | 16S rRNA-processing protein RimM |
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| Protein accession | YP_001531694 |
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| Protein GI | 159042900 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0806] RimM protein, required for 16S rRNA processing |
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| TIGRFAM ID | [TIGR02273] 16S rRNA processing protein RimM |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGACC GGGTCTGTGT CGGCGCGGTG GCCGGGGCCT TCGGGGTGCG CGGGGAGCTG
CGGATCAAGA GCTTCTGCGC GGTGCCCGAG GATATCGCCA GCTACAACCC CCTGAGTTTC
GAGGATGGGC GCGAGACGAC CCTGCGCCTG ACCGGGCAGA TCAAGAACGG CCTGTCGGGG
CGGCTGACCG GCGTGAGCAA CAAGGAGGCC GCCGACGCCC TGCGCGGCGC GCGGCTCTAT
GCGCCGCGGG ACCGGCTGCC GCGTCTGCCC GATGACGAGT TCTACCATGC CGACCTGATC
GGTCTGGCCG TGCATGACAC GGGCGGCACC CTTCTGGGCA AGGTGGCGGC GGTACACAAT
CACGGGGCGG GCGACCTGCT GGAGCTGCGC GGGCCGGGGC TGAAGGGAAG CGTCCTGCTG
CCCTTTACCC GGGCGGTGGT CCCGACCGTG GACCTGGACG CGGGCCGGAT CGTCGCCGAC
CCGCCCGAAG GCTTGTTCTG A
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| Protein sequence | MSDRVCVGAV AGAFGVRGEL RIKSFCAVPE DIASYNPLSF EDGRETTLRL TGQIKNGLSG
RLTGVSNKEA ADALRGARLY APRDRLPRLP DDEFYHADLI GLAVHDTGGT LLGKVAAVHN
HGAGDLLELR GPGLKGSVLL PFTRAVVPTV DLDAGRIVAD PPEGLF
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