Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_0313 |
Symbol | |
ID | 5711563 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | + |
Start bp | 301799 |
End bp | 303109 |
Gene Length | 1311 bp |
Protein Length | 436 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641266209 |
Product | recombination factor protein RarA |
Protein accession | YP_001531663 |
Protein GI | 159042869 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2256] ATPase related to the helicase subunit of the Holliday junction resolvase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.379077 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGATC TGTTCGACCG CGACGGGGCC GCGCCGCCCG ATGACGGGCC CCGGCCCCTG GCGGACCGGC TGCGGCCCGC GCATCTGTCC GAGGTGATCG GGCAGGACCA CCTTCTGGGC CCGGACGGGC CGCTCGGGGC CATGCTGGCC AATCGTGCGC TGTCTTCAGT GATCTTCTGG GGGCCGCCCG GGGTGGGCAA GACCACCATC GCGCGGCTGC TGGCTGCGGA AACCGACCTT GCCTTCGTTC AGATCAGCGC GATTTTCACC GGGGTGCCGG ACCTGCGCAA GGTGTTCGAG GCCGCGCGGC TGCGGCGGCA GGGCGGGCAG GGGACGCTTC TGTTCGTGGA CGAGATCCAC CGGTTCAACA AGGCGCAGCA GGACGGCTTC CTGCCCCATA TGGAGGACGG GACCATCGTT CTGGTGGGCG CCACCACGGA AAACCCGTCC TTCGAGTTGA ACGCGGCGGT CCTGAGCCGG GCACAGGTTC TGGTGCTGCA CCGTCTGGAC GCGGCGGCGC TGGAGGCGCT GTTGGCGCGG GCGGAGGCGC TGCTGGGCGT GAGCCTGCCG CTGGAGCCCG GGGCGCGGGC GGCGCTGATC GAGATGGCGG ATGGGGATGG GCGGGCGCTC TTGAACCTGA TCGAGCAGGT CGCGAGCTGG ACGCCCGAAG CGCCGCTCGA TGCCAAGGCG CTCGGGCAGC GGCTGAGCCA GCGGGCGGCG CAATACGACA AGTCGGGCGA CGGGCATTAC AACCTGATCT CGGCGCTGCA CAAATCGGTG CGGGGATCGG ACCCGGATGC GGCGCTCTAC TGGCTGGCGC GGATGCTGAC GGCCGGGGAG GACCCGAGGT ACCTGATGCG GCGGATCACG CGGATGAGCG TGGAGGATAT CGGGCTGGCC GACCCGCAGG CGCAGCGGCT GTGCCTGGAT GCGTGGCAGA CCTATGAGCG GCTGGGCAGT CCCGAAGGTG AGCTGGCGAT CGCGCAGGCG GTGGTGTACC TGGCGCTCGC GCCCAAGTCG AACGCGGCCT ATGTCGCCTA CAAGGCGGCG ATGAAGCAGG CGAAATCCAG CGGCTCGGCC CCGCCGCCCA AGCACATCCT GAACGCGCCC ACGGCCCTGA TGAAGGATCA GGGGTACGGC GCGGACTATG CCTATGACCA CGAGGCGGAG GATGGGTTTT CGGGGCAGAA CTATTTTCCC GACGACATGG CGCGGCCGCG TTATTACGCG CCGGTGGAGC GCGGGTTCGA GCGCGAGCTG GCCAAGCGGC TGGCCTATTT CGCCAAGCTG CGCGCCAAGA GGCAGAGTTG A
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Protein sequence | MADLFDRDGA APPDDGPRPL ADRLRPAHLS EVIGQDHLLG PDGPLGAMLA NRALSSVIFW GPPGVGKTTI ARLLAAETDL AFVQISAIFT GVPDLRKVFE AARLRRQGGQ GTLLFVDEIH RFNKAQQDGF LPHMEDGTIV LVGATTENPS FELNAAVLSR AQVLVLHRLD AAALEALLAR AEALLGVSLP LEPGARAALI EMADGDGRAL LNLIEQVASW TPEAPLDAKA LGQRLSQRAA QYDKSGDGHY NLISALHKSV RGSDPDAALY WLARMLTAGE DPRYLMRRIT RMSVEDIGLA DPQAQRLCLD AWQTYERLGS PEGELAIAQA VVYLALAPKS NAAYVAYKAA MKQAKSSGSA PPPKHILNAP TALMKDQGYG ADYAYDHEAE DGFSGQNYFP DDMARPRYYA PVERGFEREL AKRLAYFAKL RAKRQS
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