| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0308 |
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| Symbol | rpsK |
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| ID | 5711558 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 297963 |
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| End bp | 298352 |
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| Gene Length | 390 bp |
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| Protein Length | 129 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641266204 |
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| Product | 30S ribosomal protein S11 |
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| Protein accession | YP_001531658 |
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| Protein GI | 159042864 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0100] Ribosomal protein S11 |
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| TIGRFAM ID | [TIGR03632] 30S ribosomal protein S11 |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.331019 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCACGTG ACAAGCAGCG CACGAAGAAG AAAGAGCGCA AGAACATCGC CGCCGGCGTG
GCGCATGTGA ACAGCTCGTT CAACAACACC AAGATCCTCA TCTCCGACGT CCAGGGCAAC
GCGATCGCGT GGTCCTCGGC CGGGACCATG GGGTTCAAGG GCTCGCGTAA ATCCACCCCC
TACGCCGCCC AGATGGCCGC CGAAGACGCG GGCAAGAAGG CACAGGAACA CGGCGTCAAG
ACGCTGGAAG TTCAGGTGCA GGGCCCCGGG TCGGGCCGCG AGAGCGCGTT GCGCGCCCTG
GCGGCTGTCG GGTTCAACAT CACGGCGATC CGCGATGTGA CCCCGATCGC CCATAACGGC
TGCCGTCCGC CCAAGCGCCG CCGCGTCTGA
|
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| Protein sequence | MARDKQRTKK KERKNIAAGV AHVNSSFNNT KILISDVQGN AIAWSSAGTM GFKGSRKSTP
YAAQMAAEDA GKKAQEHGVK TLEVQVQGPG SGRESALRAL AAVGFNITAI RDVTPIAHNG
CRPPKRRRV
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