| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0140 |
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| Symbol | |
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| ID | 5711608 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 139098 |
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| End bp | 139919 |
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| Gene Length | 822 bp |
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| Protein Length | 273 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641266035 |
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| Product | VacJ family lipoprotein |
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| Protein accession | YP_001531490 |
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| Protein GI | 159042696 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2853] Surface lipoprotein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTCAGT CCCTGACCCG CGCCCTTGTC TGCCTTGCGG TGATCACCAC ACTCGGGGCC
TGTGCCTCGC CCAACCGCCC GGACGAGGTG ATCGACCCGT TCGAGCCTGC CAACCGGGGT
GTGCACAATT TCAACAAGGC GCTGGACAAG GCGATCCTGC GCGAGGCGTC CGAAGCCTAT
GTCACCCTGG TTCCGGACCC TCTGGTGCAG GGCATCAGCA ACGCGACCGG AAACCTCGAG
CAGCCCGCCC GGATCCTCAA CAACGTGCTG CAGGGGCGCG CAGAGAATGC GCTGCACAAC
ATGTTCAGAT TCCTCGTGAA TACGACCATG GGGCTCGGCG GTCTGCTCGA TCCGGCCACC
GCCATGGGCC TGCAGGAGCT CGACACCGAC TTCGGCGAAA CCATGTATGT CTGGGGCGTG
GGCGAGGGGC CCTTCGTGTC GGTCCCGCTG CTCGGGCCGC ATACCTCTCG GCACCTGTCC
GGACGGGCGG TCGACATCGT GATCGATCCC ATCGGCGAGC TTGTCACCTT CACCCGACCC
CTCACCGTGC GCGCGGGGCT CTTCACCGTC GAGCAACTCA AGGACAGGGC GGAGTTCGGA
TCGGTCGTGG ACGACCTGCT CTACAACAGC ATCGACAGCT ACGCCTCTAC ACGCATTCTT
TACCTGCAGA ACCGGCGCTT CCGGCTTGGG AGTGGGACCG GAAACGATTA TCTCGATCCC
TACGACGATT TCGGCGGAGA CCCCTCCGTG GCCCTGATCG AGGGCGGCGC CCCTGCCGAC
GACCTTTACT TCGATCCCTA CGAGGACCCC TATGTCGAGT AA
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| Protein sequence | MFQSLTRALV CLAVITTLGA CASPNRPDEV IDPFEPANRG VHNFNKALDK AILREASEAY
VTLVPDPLVQ GISNATGNLE QPARILNNVL QGRAENALHN MFRFLVNTTM GLGGLLDPAT
AMGLQELDTD FGETMYVWGV GEGPFVSVPL LGPHTSRHLS GRAVDIVIDP IGELVTFTRP
LTVRAGLFTV EQLKDRAEFG SVVDDLLYNS IDSYASTRIL YLQNRRFRLG SGTGNDYLDP
YDDFGGDPSV ALIEGGAPAD DLYFDPYEDP YVE
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