Gene Dshi_0115 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_0115 
Symbol 
ID5711738 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp113830 
End bp114387 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content69% 
IMG OID641266010 
Productputative methyltransferase 
Protein accessionYP_001531465 
Protein GI159042671 
COG category[L] Replication, recombination and repair 
COG ID[COG0742] N6-adenine-specific methylase 
TIGRFAM ID[TIGR00095] RNA methyltransferase, RsmD family 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGATCA TCGCCGGTCG GTTCGGAGGG CGCAAGCTTG CGAGCCTGGG CAAGGGCGAT 
GCGGCGGCAC ATCTGCGCCC GACACCGGAC CGGGTGCGCG AGGCGCTGTT TTCATCCCTG
ACGTCGGGCG CGTACGGCGA CCCGATCACC GGCGCCCGGG TGCTGGACCT GTTCGCTGGC
ACCGGAGCGC TCGGGCTGGA GGCGCTGTCG CGCGGCGCGG CTCATGTCAC CTTCGTGGAA
ACGGGCCGCG TGGCCCAGCG ACTGCTGGCC GACAACATCC GGAGCCTCGG AGTGGCGGCA
GAGACCCGCG TGCGGCGAAG CGATGCCTGC AAGCTTGGTC CGCCGGAAGT GGCGCCGTTC
GCTCTCGTGT TTCTCGACCC GCCTTACGGT CAGGGGCTCG GCGTGCGCGC GCTTGCGCAG
CGGGACTGGA TCGCACCGGG GGCCTTGATT GTCTGGGAAG AGGGTGCGCC CCAAGACCCG
CTGCCGGGTT TTGATCTACG CGACCAGCGG CGCTATGGTG GCACCCATGT GACCGTGTTG
GAGGCACGCG ATGTCTGA
 
Protein sequence
MRIIAGRFGG RKLASLGKGD AAAHLRPTPD RVREALFSSL TSGAYGDPIT GARVLDLFAG 
TGALGLEALS RGAAHVTFVE TGRVAQRLLA DNIRSLGVAA ETRVRRSDAC KLGPPEVAPF
ALVFLDPPYG QGLGVRALAQ RDWIAPGALI VWEEGAPQDP LPGFDLRDQR RYGGTHVTVL
EARDV