Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_0115 |
Symbol | |
ID | 5711738 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | + |
Start bp | 113830 |
End bp | 114387 |
Gene Length | 558 bp |
Protein Length | 185 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641266010 |
Product | putative methyltransferase |
Protein accession | YP_001531465 |
Protein GI | 159042671 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0742] N6-adenine-specific methylase |
TIGRFAM ID | [TIGR00095] RNA methyltransferase, RsmD family |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGGATCA TCGCCGGTCG GTTCGGAGGG CGCAAGCTTG CGAGCCTGGG CAAGGGCGAT GCGGCGGCAC ATCTGCGCCC GACACCGGAC CGGGTGCGCG AGGCGCTGTT TTCATCCCTG ACGTCGGGCG CGTACGGCGA CCCGATCACC GGCGCCCGGG TGCTGGACCT GTTCGCTGGC ACCGGAGCGC TCGGGCTGGA GGCGCTGTCG CGCGGCGCGG CTCATGTCAC CTTCGTGGAA ACGGGCCGCG TGGCCCAGCG ACTGCTGGCC GACAACATCC GGAGCCTCGG AGTGGCGGCA GAGACCCGCG TGCGGCGAAG CGATGCCTGC AAGCTTGGTC CGCCGGAAGT GGCGCCGTTC GCTCTCGTGT TTCTCGACCC GCCTTACGGT CAGGGGCTCG GCGTGCGCGC GCTTGCGCAG CGGGACTGGA TCGCACCGGG GGCCTTGATT GTCTGGGAAG AGGGTGCGCC CCAAGACCCG CTGCCGGGTT TTGATCTACG CGACCAGCGG CGCTATGGTG GCACCCATGT GACCGTGTTG GAGGCACGCG ATGTCTGA
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Protein sequence | MRIIAGRFGG RKLASLGKGD AAAHLRPTPD RVREALFSSL TSGAYGDPIT GARVLDLFAG TGALGLEALS RGAAHVTFVE TGRVAQRLLA DNIRSLGVAA ETRVRRSDAC KLGPPEVAPF ALVFLDPPYG QGLGVRALAQ RDWIAPGALI VWEEGAPQDP LPGFDLRDQR RYGGTHVTVL EARDV
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