| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_2477 |
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| Symbol | |
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| ID | 8420339 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 2840739 |
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| End bp | 2841440 |
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| Gene Length | 702 bp |
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| Protein Length | 233 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 645039080 |
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| Product | Exonuclease RNase T and DNA polymerase III |
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| Protein accession | YP_003199337 |
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| Protein GI | 258406595 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2176] DNA polymerase III, alpha subunit (gram-positive type) |
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| TIGRFAM ID | [TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.00576193 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAACGGT ATACGATGGC CCAATTCGAG GCGGGCGAGA GGCTCAAGGC CCACAAAAAG
GTCTTTCAGG GACTGGACCC GACCAAGCCG CTGTCAGAGT TCTCCTTTTG TGTCCTGGAC
ACGGAACTGA CCGGACTCCG GCGGCGCCAC GAAATTATCT CTATCGGCGC TGTGCGGATC
GAACATCTGG CCTTAAAACC CCTGGACCGG TTTTATACCG AAGTCTGTCC CAAGGCTTGG
ACCAAAACAG GAACCCTGAT CCACCGCATT TCGCCCCAGC AATGCCAGGA TGCCCCAAAG
ATCGGGAAGG TCCTGCCCGA GTTGATCGCC TATCTCGGCA CCTCGCTGCT TATCGGGCAC
AATATCGCTT TGGACCTCCA ATTTCTCCAA AAGGCATGTA AAAAACACCT CGGCCACCCA
CTGGTGCATC CTTGTATCGA CACCCTGCGC TTGGCCCGGG TCTATGAGGA ATCCCGTTGG
GAATCGTATT ATGACCGCTT CACCCTCCGG GTGTCCTACC AACTTCAGGA GTTGGCCCAG
GCCTATGGCC TGCCCTGCTT CCCGGCCCAC AACGCGGCTT CAGACGCCCT GCAGACCGCC
TATCTCTTTG TGTATCTGGT CCATAAACTC CGGGAAACTC ATCCGCTGGT GACCCTGGAG
GAACTGTACC GCTGCGGTCG CGGCTGGAGG TGGTATTTCT GA
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| Protein sequence | MKRYTMAQFE AGERLKAHKK VFQGLDPTKP LSEFSFCVLD TELTGLRRRH EIISIGAVRI
EHLALKPLDR FYTEVCPKAW TKTGTLIHRI SPQQCQDAPK IGKVLPELIA YLGTSLLIGH
NIALDLQFLQ KACKKHLGHP LVHPCIDTLR LARVYEESRW ESYYDRFTLR VSYQLQELAQ
AYGLPCFPAH NAASDALQTA YLFVYLVHKL RETHPLVTLE ELYRCGRGWR WYF
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