Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_2422 |
Symbol | |
ID | 8420282 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | - |
Start bp | 2771983 |
End bp | 2772468 |
Gene Length | 486 bp |
Protein Length | 161 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 645039023 |
Product | putative transcriptional regulator, AsnC family |
Protein accession | YP_003199282 |
Protein GI | 258406540 |
COG category | [K] Transcription |
COG ID | [COG1522] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0000360306 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGTACAG TGTATGAAGA GTTGACGGCG AAAGACAAGG CTATTTTGCG TATCGTCCAG GGAACATTGC CGGATTCGGC AACCCCTTTT GCTGATATCG CCCGGGAAGT CGGGGTCGAC GAAGAGGTCG TGCTCGAGCT GTTGCGCCGT TTGCAAGCCA ACGGCAGTAT CAGACGCTTC GGGGCTACCT TGCGCCACCA ACAGGCCGGA TACGGGCACA ACGCCATGGT GGCCTGGTAT GTGGAAGACG ACCGCGATGT AGAGCAGGTC GGCAGACGCA TGGCCGAGCG CACGGAGATC ACCCATTGTT ATCAGCGCCG CAATTGTCTG GACTGGCCGT ATAATATGTA TACCATGATC CATGGGCGCA GTCTGGAGGA TTGCTTGCGC GTGGTCCATG AACTCCAGGC TGAGACCGGA GTAGAGCAAT ATGAGGTCCT GTTTAGCGAC CAGGAACTGA AAAAAACCTC CATGCGGTAT TTCTAA
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Protein sequence | MSTVYEELTA KDKAILRIVQ GTLPDSATPF ADIAREVGVD EEVVLELLRR LQANGSIRRF GATLRHQQAG YGHNAMVAWY VEDDRDVEQV GRRMAERTEI THCYQRRNCL DWPYNMYTMI HGRSLEDCLR VVHELQAETG VEQYEVLFSD QELKKTSMRY F
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