Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_2409 |
Symbol | |
ID | 8420269 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | + |
Start bp | 2758163 |
End bp | 2758936 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 645039010 |
Product | Prepilin peptidase |
Protein accession | YP_003199269 |
Protein GI | 258406527 |
COG category | [N] Cell motility [O] Posttranslational modification, protein turnover, chaperones [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1989] Type II secretory pathway, prepilin signal peptidase PulO and related peptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0391481 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACCTTG CCTCGGTTTT TTTTCCTCTG CTTGCGCTCT TTCTCGGCCT GGTGCTGGGC AGCTTCTATA ACGTCTGCAT CCACCGCTAC CTGAGCCAAA CATCCATTGT CTGGCCCGGC TCGCATTGCC CGCAATGCGG TCACAGGCTG AGCTGGTGGG AAAATATTCC GCTCGTGAGT TTTCTCGTTT TGCGCGGACG CTGCCGTGCC TGCCGCACCC CGATCAGCTG GCGCTATCCC CTGGTCGAGG GCCTTTCCGG ACTCTGGGCC CTGGCCCTGG CCTGGCAATT CGGTCCCGGC ACCGCCTGGC TGGTGTATAT GGGCTTCGGC GGACTGCTCA TTGTGGCCAG TTTCATTGAT CTGGACAGCT TCATCCTCCC CGACCGTCTG ACGCTGCCCG GCGGGCTCCT GGCCCTGATC GCGGCACCGA CGCTGCTGGG GCTGTCCTGG AGTTCGGCAG CCATCGGGGC CGTGGCCGGA GCGGGCACCT TCTGGATCCT GCAACAGGGG TACAAACTCC TGCGCGGGGT CGAAGGACTG GGCACCGGGG ACATCAAACT CATGTTCCTG CTCGGTGGAC TGCTCGGCTG GCAATCCCTG CCCCTGGTGG TCTTTCTCGG CGCCCTGAGT GGTCTGGGCG TCAGCGTGGT CTACCTTGTC CGGGACCGCA GCCAAGGTAT GCAGACCGCC ATCCCCTTCG GCCCATTTTT GAGCCTGGGC GGGATGCTGA CAATCCTCTT CGGCCCATCA CTTCTGCAAT GGTATCTGGG CTGA
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Protein sequence | MDLASVFFPL LALFLGLVLG SFYNVCIHRY LSQTSIVWPG SHCPQCGHRL SWWENIPLVS FLVLRGRCRA CRTPISWRYP LVEGLSGLWA LALAWQFGPG TAWLVYMGFG GLLIVASFID LDSFILPDRL TLPGGLLALI AAPTLLGLSW SSAAIGAVAG AGTFWILQQG YKLLRGVEGL GTGDIKLMFL LGGLLGWQSL PLVVFLGALS GLGVSVVYLV RDRSQGMQTA IPFGPFLSLG GMLTILFGPS LLQWYLG
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