Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_2345 |
Symbol | |
ID | 8420205 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | - |
Start bp | 2671557 |
End bp | 2672507 |
Gene Length | 951 bp |
Protein Length | 316 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 645038947 |
Product | 17 kDa surface antigen |
Protein accession | YP_003199206 |
Protein GI | 258406464 |
COG category | [S] Function unknown |
COG ID | [COG3134] Predicted outer membrane lipoprotein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCAGGC GATTGCGATT GTGGATTGGG ATTGGGGTGT TGGGGCTCGC GCTGCTTAGC GCCGGGTGTG TGACCGACGG CATGGGCAAT AAACAAGCGG GGGGCACGGC CATCGGCGCT TTGGCAGGAG GATTGGCGGG GAGCTTGTTC GGCTCGGGCC AGGGCAAGAC AGTGGCCATT GTCGCCGGGG CACTGGCCGG TGCTGCGCTT GGAAATTATA TCGGCTCCAT TCTTGACGAG CGCGACCAGC AGGCCGTGGC GGCAGAATCC GCGCGGACCT TGAGTACGGC CCGGGACGGT CAAACCAATA CCTGGTCGAA TCCCGAGAGT GGCGCGTCGG CGGCCATTAC GGTGGAGAAA ACCGAACGGG TGACGCGCAA GGTGCCCATT GTCCGCGAAA AATATGTCGC TAGCCCGGGC GAACTGGTGC TGATCAACAC GGCGCATGAG GCCCTGAAGA CTTCCAATGT CCGCAGCGGT CCCGGGACCA CATACAAGGC CGTCAATCTG CTCCAGCAAG GCGACGTGGT TACGGTTGTC GGGCAGGTTA AAGATCGGAA CTGGTATATG GTTGGACGCG ACGGGCGGTC CATCGGGTAT GTCTACGCCT CGCTTCTGCG TGAGGTGCCC GAGTCAGCCG GTGCTCCGGA GGTCGTGCCG GTGCAGACGG CAAAGGCTTC GGCAGAGCCG GAGCAACAGC AGGCGTCCCA AGAGACAGCA GATCCGTCGC TGGCGAGTGC CCGGCAGGGC GTGTTGCGGA CTGAAGCGTT GGATCTTGAT GATATTGAGT CCTCCATGGA TTTGGAGGGA CAAGGGTTGG TCGCCGAAGA AGTGCAGGCT GAGACTGAAG TGCGGACCGT GACAGTGGCC GTGGAAAACG ACAAGGGGCA GCAGGAGACG AATACCTTCC GCGCCAGCCG CGCCGGTGAC GGGGCCTGGG AGGTGATTTA G
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Protein sequence | MSRRLRLWIG IGVLGLALLS AGCVTDGMGN KQAGGTAIGA LAGGLAGSLF GSGQGKTVAI VAGALAGAAL GNYIGSILDE RDQQAVAAES ARTLSTARDG QTNTWSNPES GASAAITVEK TERVTRKVPI VREKYVASPG ELVLINTAHE ALKTSNVRSG PGTTYKAVNL LQQGDVVTVV GQVKDRNWYM VGRDGRSIGY VYASLLREVP ESAGAPEVVP VQTAKASAEP EQQQASQETA DPSLASARQG VLRTEALDLD DIESSMDLEG QGLVAEEVQA ETEVRTVTVA VENDKGQQET NTFRASRAGD GAWEVI
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