Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_2338 |
Symbol | |
ID | 8420198 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | + |
Start bp | 2658973 |
End bp | 2660094 |
Gene Length | 1122 bp |
Protein Length | 373 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 645038940 |
Product | efflux transporter, RND family, MFP subunit |
Protein accession | YP_003199199 |
Protein GI | 258406457 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 48 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAACCG CTATCGCTAT TGCTTTACTC GCCAGCCTCC TCTTGCCGGC CACAGGCTTC ACCCAGCCCC AGGGGAAGAA CGCTCCGCCG CCGATGGTCA AAGTCACTCC GGTCCAGCTA CGCAACGCCA ATACACCCAA CAGGTATGTT GGCCATGTCG AGGCACGAAC ATCCGTCAGT CTCCGGGCCC GCGTCGACGG CTACCTGGCC CAAGTCAACT TCAAGGAAGG CGCCTACGTC GAAAAAGGGC AGCTTTTATA TACAATCGAA CAGGGTCCCT ACCAGGCCCG CGTCGATTCT GCCCAAGCCA AGGTGGCCCA GGCCGAAGCC GATGTGTTCA AATCCCAAAC CCGCCTGAAA CGCCTCCAGG CCGCTCAGAG CCAGAGCGTG CCGCAAACCG ACATGGACGA CGCCAAGGCC GCAGTGGACA TGGCCAAGGC GCGGCTTCAG GAAGCCAAGG CCAATCTCCA GACCGTTCGC ATAAACCTGA ACTACACCAC CATTGAAGCT CCTATAAGCG GGAGGGTCGG GAAAAGTTTT TTTAAAGAAG GCGACCTCGT CGCCCCCTCC TCGGGTCCCC TGGCCGAAGT CGTCAGCATG GACCCCATCC GGGTGCAATT TTCCGTCAAC GAGCGCGAAG TCGGGGCTCT GCATCAGGCC GTGAAATCCA CCGGCGACAA AACGAAAACC GGCACAGCGC CGTTGCGCCT GCAGTTCACG GACAAGACCA CCTACCCCCA CAACGGCACA ATGGAATTCA TGGACAACAA AATGGACCCT GACACCGGGA CCATTGCCGC CTGGGCCTCT TTCGCCAATC CCGAGGGCCG ACTCATTCCC GGAGAATACG TCAATGTTGT GGTGCCTTCC GGCCCGCCGC AACAGCGCCC TTCGGTGCCC CAGGTGGCAG TACAGCGTGA CGGCGACGGT GCCTTTGTCT TTGTCGTCGA TGCGAAGAAC ACAGTCCGCA AGCGTCAGAT TACTATCGGA GAAAGTGTCG CTGACACGTT TATCGTCACT TCCGGCCTCA GCACCGGTGA GCGCGTGGTG ACCGAGGGCA TCCAGAAAGT GGCTCCCGGG AAGCGGGTTA CAATCCGCAA TGCGGAACAA AAGGACAATT AA
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Protein sequence | MRTAIAIALL ASLLLPATGF TQPQGKNAPP PMVKVTPVQL RNANTPNRYV GHVEARTSVS LRARVDGYLA QVNFKEGAYV EKGQLLYTIE QGPYQARVDS AQAKVAQAEA DVFKSQTRLK RLQAAQSQSV PQTDMDDAKA AVDMAKARLQ EAKANLQTVR INLNYTTIEA PISGRVGKSF FKEGDLVAPS SGPLAEVVSM DPIRVQFSVN EREVGALHQA VKSTGDKTKT GTAPLRLQFT DKTTYPHNGT MEFMDNKMDP DTGTIAAWAS FANPEGRLIP GEYVNVVVPS GPPQQRPSVP QVAVQRDGDG AFVFVVDAKN TVRKRQITIG ESVADTFIVT SGLSTGERVV TEGIQKVAPG KRVTIRNAEQ KDN
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