| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_2202 |
|---|
| Symbol | |
|---|
| ID | 8420058 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfohalobium retbaense DSM 5692 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013223 |
|---|
| Strand | - |
|---|
| Start bp | 2505080 |
|---|
| End bp | 2505655 |
|---|
| Gene Length | 576 bp |
|---|
| Protein Length | 191 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 645038801 |
|---|
| Product | Fimbrial assembly family protein |
|---|
| Protein accession | YP_003199064 |
|---|
| Protein GI | 258406322 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 45 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCCGCA TAAATCTCTT GCCGCAACAA AAGCGGGCCA AAGCGTCCCA AGCCGGGAAG
GAACTCGCCT TTCTGGTTTT TCTGTTTTGT GTGCTCCTGG GAGGCATCGG GGGGACGCAG
TATTGGATGC ACCGGGAAAT CCAGACCCTC GAAGAGCATA TCGCCACCAA GACCACCCGG
AAAAACGAAC TTTTTGAGCA AATTCGCCAT CTGCGCCAGC AGGAGAAGGA ACTCGCCTCC
CTTGAAGAAC GCATTCAGGC CATCAAGATC ATCCGGGAGG CCCAGGGATT GCCGGTCCGG
TATCTCGACG CGCTGGTCTC TTTGCTGCCT GAGGACGAAA TCTGGTTCGA ATCACTGCAA
TTTTCCCGCA GCAGGGGGAT CAGCCTGCGC GGCGTGGCCT TGGATAACCA AGCCTTTGCC
CAATATGTCC AGCAGCTGAG GGAGTCTCCG TATATTCAGT CCATCCAGAC CCGCCGGACC
TCTCGCCGCC GGGTGCAGAA TCTGGATCTG GTGGAATTCC AGACGGAGAT CAGTACTGGA
GAGCCTGAAG ACAAAGGGGA GGAAGGACGT GGCTAA
|
|---|
| Protein sequence | MIRINLLPQQ KRAKASQAGK ELAFLVFLFC VLLGGIGGTQ YWMHREIQTL EEHIATKTTR
KNELFEQIRH LRQQEKELAS LEERIQAIKI IREAQGLPVR YLDALVSLLP EDEIWFESLQ
FSRSRGISLR GVALDNQAFA QYVQQLRESP YIQSIQTRRT SRRRVQNLDL VEFQTEISTG
EPEDKGEEGR G
|
|---|
| |