Gene Dret_1972 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_1972 
Symbol 
ID8419817 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp2261046 
End bp2261396 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content60% 
IMG OID645038560 
Producthypothetical protein 
Protein accessionYP_003198834 
Protein GI258406092 
COG category[S] Function unknown 
COG ID[COG3937] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.538462 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.163102 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGATA CCCTCAAACG CTCCATTCTC GCTAGTCTGG GCGCGGCCTT TATCACCAAG 
GACCGTGTCG AAGAGGCCAT GCAGCGTCTT GTCGAACGCG GTGAGCTGAC CCGCGAGGAG
GCCCGACGGG TCACCGAAGA AATGGCCGCG ACCGGCGAAC GAGAACTCGC CGAAATCCGT
GACGAAATAA GCAAAGCGGT TACCAATTCC CTGGAAGGGT TGCACATCGC GACCCAGAGC
CAGGTCGAGA CCCTTGAGTC CAGACTCAAG GGCGTCGAAA GCCGCCTGGG ACAGCTCGAG
GCTCAGGTCG AACGTTTAGA ACCCGCCACT GAAGAAGCCG CCCCCGAATA A
 
Protein sequence
MLDTLKRSIL ASLGAAFITK DRVEEAMQRL VERGELTREE ARRVTEEMAA TGERELAEIR 
DEISKAVTNS LEGLHIATQS QVETLESRLK GVESRLGQLE AQVERLEPAT EEAAPE