Gene Dret_1958 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_1958 
Symbol 
ID8419803 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp2240728 
End bp2241195 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content58% 
IMG OID645038546 
Producttranscriptional regulator, AsnC family 
Protein accessionYP_003198820 
Protein GI258406078 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0996907 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGACG ACACTGACAG ACACATTCTG CATATCCTGC AGGAAAATGC CCGGGCCAGT 
AATGCCTCCA TCGCCCGTCA GATCGGCATG GCGCCTTCGG CTGTCCTGGA ACGGATCCGC
AAACTGGAAA AACGCGGCGT CATCCAGGGC TATGAAGTCA AACTCAATGC CAAAAAGCTC
GGCCTGGCTC TGACTGCTTT TATCCGCGTC GGTTCTGAAG AGCGGGTCGG GAGCACCCAG
ACCGGCCGCA ACCTCGCCCA ACTCCCCGAA GTTCAAGAAG TCCACCATGT CGCGGGCCCC
GACTGTTATC TCGTCAAAGT CCATGTCCCG GACAACGAAT CCCTCGGCCA ACTCTTGCAA
CGTTTCGGCG CCATAGAAGG CGTCAGTTAC ACCCATACTG TCCTGGTCCT CACGCCGATC
AAGGAATCGG CCCCCCTGCC GCTGCCGGAA CCTCATCCGG CTTCCTAG
 
Protein sequence
MIDDTDRHIL HILQENARAS NASIARQIGM APSAVLERIR KLEKRGVIQG YEVKLNAKKL 
GLALTAFIRV GSEERVGSTQ TGRNLAQLPE VQEVHHVAGP DCYLVKVHVP DNESLGQLLQ
RFGAIEGVSY THTVLVLTPI KESAPLPLPE PHPAS