Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_1958 |
Symbol | |
ID | 8419803 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | + |
Start bp | 2240728 |
End bp | 2241195 |
Gene Length | 468 bp |
Protein Length | 155 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 645038546 |
Product | transcriptional regulator, AsnC family |
Protein accession | YP_003198820 |
Protein GI | 258406078 |
COG category | [K] Transcription |
COG ID | [COG1522] Transcriptional regulators |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.0996907 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATTGACG ACACTGACAG ACACATTCTG CATATCCTGC AGGAAAATGC CCGGGCCAGT AATGCCTCCA TCGCCCGTCA GATCGGCATG GCGCCTTCGG CTGTCCTGGA ACGGATCCGC AAACTGGAAA AACGCGGCGT CATCCAGGGC TATGAAGTCA AACTCAATGC CAAAAAGCTC GGCCTGGCTC TGACTGCTTT TATCCGCGTC GGTTCTGAAG AGCGGGTCGG GAGCACCCAG ACCGGCCGCA ACCTCGCCCA ACTCCCCGAA GTTCAAGAAG TCCACCATGT CGCGGGCCCC GACTGTTATC TCGTCAAAGT CCATGTCCCG GACAACGAAT CCCTCGGCCA ACTCTTGCAA CGTTTCGGCG CCATAGAAGG CGTCAGTTAC ACCCATACTG TCCTGGTCCT CACGCCGATC AAGGAATCGG CCCCCCTGCC GCTGCCGGAA CCTCATCCGG CTTCCTAG
|
Protein sequence | MIDDTDRHIL HILQENARAS NASIARQIGM APSAVLERIR KLEKRGVIQG YEVKLNAKKL GLALTAFIRV GSEERVGSTQ TGRNLAQLPE VQEVHHVAGP DCYLVKVHVP DNESLGQLLQ RFGAIEGVSY THTVLVLTPI KESAPLPLPE PHPAS
|
| |