Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_1930 |
Symbol | |
ID | 8419775 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | + |
Start bp | 2212082 |
End bp | 2213278 |
Gene Length | 1197 bp |
Protein Length | 398 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 645038518 |
Product | phosphonopyruvate decarboxylase-related protein |
Protein accession | YP_003198792 |
Protein GI | 258406050 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3635] Predicted phosphoglycerate mutase, AP superfamily |
TIGRFAM ID | [TIGR00306] 2,3-bisphosphoglycerate-independent phosphoglycerate mutase, archaeal form [TIGR02535] proposed homoserine kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTCCCA AAATCGTTTT TTGTATTGCC GACGGCATGG GCGATTATCC CGTCCCCTCC CTTGGTGGAA AGACTCCCCT CGAAGCCGCG GAGACCCCGG AACTGGACGC GCTCTGCCCC AACGGTCTGC AGGGGCAGGC CCAGACCATC CCCGAGGGCA TGGGCCCGGG CTCAGACGTG GCCAATATGG CCCTGCTCGG GTATCCCCCG CGGACGTACC ACACCGGCCG GGGGCCCATC GAAGCCGCGG CCCAGGGACT TACGCTCGCC TCCAACGACA TTGTCTGGCG GCTCAACCTG GTCACCACCG ATGGGTGGAC GCCGGAAGCG GTCCTGCGCG ATTACGCCGC TGGCCATATC GATACGGCCA CGGCGCGGGA TATGATCCTT GAACTGAACG AGACCTTCGG CGACAGCACC TGGCAACTCG TCCCCGGCAT CCAGTACCGC CATCTCCTGG TCCAAAAAGG GGGTGCGGAC AGTCCGGAAG CTGAACTCGC CATCCGCCCG CCCCACGATA TCCTCGACCA GCCCATTGGC GCTGATCTCG AGGCTTTTGG TTCCAGTCCG GCGCTCAAGA CGTTGCTTGC CTCCTCGGCC GAACGTTTGG CAAGCCGGGG CGGAACCGCC ACGGCCCTTT GGCCCTGGGG CCAGGGCAAG TCGCTGCATC TGCCCGATTT CAGTGAACGG TTCGGCCTCA AGGGCCAAGT GGTATCGGCT GTGGATCTGG TCAAGGGACT GGGACGCGCC GCCCAGATGG ACGTGGCGGA AGTGCCTGGG GCCACTGGTC TGCTGGACAC CAACTACGCC GGGAAAGTCG AGGCCGCGCT GGAATTTCTC GACCAGGGCG ATTTTGTCTA CCTCCATGTC GAGGCCCCGG ATGAATGCGG TCACGCGGGC GACCCCGAGG CCAAGCAAGA GGCCATCGCC CGCTTTGACA GCCGCGTTCT CGCGCCCCTG CGCCAGGCTC TGGGGCAGAC CGCCTATTTC ATGGTCGCTT GCGATCACCT CACACCGGTC CGGGAACGCA CCCACACCAG CGATCCTGTC CCCTTTCTGC TCTCCGGGCC GGGGCTGCGC CCGAACACCG CGCACAGCAC GTTCACCGAA GCCACGGCCG ACAGCGCCGA ACTCAGCCTG TCCGCGGGAG AGGACCTGCT GCCGTTTGTC CTCAAAACCA TCGCCGATCT GAAATGA
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Protein sequence | MLPKIVFCIA DGMGDYPVPS LGGKTPLEAA ETPELDALCP NGLQGQAQTI PEGMGPGSDV ANMALLGYPP RTYHTGRGPI EAAAQGLTLA SNDIVWRLNL VTTDGWTPEA VLRDYAAGHI DTATARDMIL ELNETFGDST WQLVPGIQYR HLLVQKGGAD SPEAELAIRP PHDILDQPIG ADLEAFGSSP ALKTLLASSA ERLASRGGTA TALWPWGQGK SLHLPDFSER FGLKGQVVSA VDLVKGLGRA AQMDVAEVPG ATGLLDTNYA GKVEAALEFL DQGDFVYLHV EAPDECGHAG DPEAKQEAIA RFDSRVLAPL RQALGQTAYF MVACDHLTPV RERTHTSDPV PFLLSGPGLR PNTAHSTFTE ATADSAELSL SAGEDLLPFV LKTIADLK
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