Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_1927 |
Symbol | |
ID | 8419771 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | - |
Start bp | 2207538 |
End bp | 2208962 |
Gene Length | 1425 bp |
Protein Length | 474 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 645038514 |
Product | ABC transporter related |
Protein accession | YP_003198789 |
Protein GI | 258406047 |
COG category | [R] General function prediction only |
COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCAGAAGA GTGATCAGTG CCGTCCATGG TTGCGCCTGG CCGGAGCCCG GGTCCGTCTG GGCAGCACGA CCGTGCTCAC CGGTCTGGAT TGTGCCCTGT ATCCCGGCGA ACATGTCGTG GTTACCGGAG CCAATGCCGC GGGCAAATCG ACGTTTTTGC GATTGTGCGC CGGCCTTGTC TGGCCGACCG ATCCGGCGTG CCGGGAATAT ATCCTCCAGG GCCGCAGGAC AACGAGTCCG CTTCCGGTGC GACACCACGG CGCCTGGGTG GCTCCGGGGC AGCAACTCGC CTACCAGGGA CGACAGGCCC GGGTCACGGT CTGGGAAGTG GTTGCCACCG GGCTCACGAA CACCCCGTTT GTATACGTCC CTTTGTCTGA GGCCGACGCA ATGCAGGTCT GGACCACCCT GGAGAGGTTC GGGCTGCAGG AGTTGGCCGA GCGTTCATTT GCCGGACTTT CGCAGGGGCA GCAGTGGCAG GTCCTTCTGG CCAGAGCCAT GAGCGGTGGG CCGCGATTTT TGTTCCTGGA CGAATGCACC TCGGGTCTTG ATGGGCCATC GCGGGATCTG TTCTGGCAGG CCCTGCACAC GGCGGTGCAA CTGGGGGCCC ATGCGTTATT GGCCACACCG CAGCCATGGG CTTGTCCGGA ATGGATCGGG CGGACAATCA CCCTGGATCA GGGGCGCATC ATCGCTGGCC CGATGCGACA GACTGCCGAA CAAGGGGCTG CAGCAAAACC GGGTGCATCT GCTGGGGCAA CGACGGGGGA GCCGACGAAT TCCCGTGTGC TGGTCCGCTT GAGCGGGGCC CGGGTCCGGC ACGAGGGCAG GGATCTGCTG GGACCCGTCT CTTTGGCCAT CCGGGCGGGC ACGGTCTGGG CGGTGCGAGG ACCCAACGGC GCCGGCAAGA CGACATTGCT GCGACTTGTC AGCGGCGACG CCCCGCCATA TGCCGGGCAG GGGCGAGAAT ACCCCTGTTT GCCGGCCCAA AGCGACAGGG CCAGACGCGA GACCCGAATC CGAGCGGTTT TTCCCGATCA ACGGATCGAG CTGTTTGTCC GCAACCTCCC AGCCGGCGCT ATTGCCGGGC ACAACGCGGG AGAAACCCGG CAGTTGTGGT GCCGCTTCGG CTTGCAGGGA CTCGAGGAGC GACCGTTTGC GCATTTGTCC TCAGGCCAAC AGCAAAGGGT TCTTCTGACC AGGGCCTTGG CCGGAGCCCC GTCCCTGCTC GTTCTGGACG AGCCTTTCAC GGCCTTGGAT GCCTGGGGGC GGGCTGTCTG CCGCGAGGTG GTCCAGGAGC ATATCGCCCG CAACGTCGCA GTCGTGTACA GCGCCCACGC TGAGGCCGAT TGTTTTGCCG GGACCGATCA CGTCCTGTGG GTCTCGGGGG GAAGAGTCCG TGATTCCGGC TTGCAATCGC GATGA
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Protein sequence | MQKSDQCRPW LRLAGARVRL GSTTVLTGLD CALYPGEHVV VTGANAAGKS TFLRLCAGLV WPTDPACREY ILQGRRTTSP LPVRHHGAWV APGQQLAYQG RQARVTVWEV VATGLTNTPF VYVPLSEADA MQVWTTLERF GLQELAERSF AGLSQGQQWQ VLLARAMSGG PRFLFLDECT SGLDGPSRDL FWQALHTAVQ LGAHALLATP QPWACPEWIG RTITLDQGRI IAGPMRQTAE QGAAAKPGAS AGATTGEPTN SRVLVRLSGA RVRHEGRDLL GPVSLAIRAG TVWAVRGPNG AGKTTLLRLV SGDAPPYAGQ GREYPCLPAQ SDRARRETRI RAVFPDQRIE LFVRNLPAGA IAGHNAGETR QLWCRFGLQG LEERPFAHLS SGQQQRVLLT RALAGAPSLL VLDEPFTALD AWGRAVCREV VQEHIARNVA VVYSAHAEAD CFAGTDHVLW VSGGRVRDSG LQSR
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