Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_1869 |
Symbol | |
ID | 8419712 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | + |
Start bp | 2143058 |
End bp | 2144174 |
Gene Length | 1117 bp |
Protein Length | 371 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 645038455 |
Product | hypothetical protein |
Protein accession | YP_003198731 |
Protein GI | 258405989 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1186] Protein chain release factor B |
TIGRFAM ID | [TIGR00020] peptide chain release factor 2 |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.00638967 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTTACAAC TATCAGATAT CCGCAAAGAA AGTCTTGAGT TGCAGGAAAA ATTCGAATCC CTCTGGAGGC GCCTTTGACC TGCAAGGCCA TCACGACCGA CTGAAAACCA TCGAGGAAGA ACTCGCCAAA CCCGAAGCAT GGCAGAATCC CGAAGAGCTG ACACCGATCC TGCGCGAGAA GAGCCGGCTG ACCGAGGAGA TCGAATCCTG GGAAGCCTTG CGCGATCTGC ATGAGGACCT GCAGGAATGG CTGGAAATGG CGGACGAGGA CCAGGGCCAG GAGGTCCTTC AGGCCCTTTC GGAAACCAAC GCCAATCTCG CCGCCCAGCT CAACAAGGTC GAAATGGAGC TGTTGCTGTC CAAGCCTGAG GACAAGGGCA ACGCCATCCT GGAGATCCAT CCCGGTGCCG GCGGCACCGA GGCCCAGGAC TGGGCCGAGA TGCTCCTGCG CATGTATTTG CGCTGGTGCG AACGGCGGGG ATTCAAGGTC CAGGAACTCG ACTCCCTGCC AGGGGAGGAG GCCGGGATCA AAAGCGTTAC CCTCCAGATC CAGGGCACCT TCGCCTACGG CCTGCTCCAG GCGGAAAAGG GCATCCACCG GCTCATCCGG ATCTCCCCCT TCGACACCTC AGGACGGCGC CACACCTCGT TCGCCTCCGT GGACGTCTAC CCCGAGGCCG CCGACGATAT CGAGATCGAC GTCAACGACG AAGACATCCG CGTCGACGTT TTCCGTTCCA GCGGCCCCGG CGGGCAGAAT GTGAACAAAA CCAGCTCCGC CATCCGGATC ACCCACTTCC CGTCCGGCAT TGTCGTCCAG TGCCAGAACG AGAAGTCCCA GCGCCGGAAT AAAGAAACGG CCATGAAGAT CCTCAAATCC CGTTTGTACG ACCAGGAGCG CAAAAAACGG GAAGCTGACA AACAGGCCGA ATACGCCTCC AAGGAGGCCA TTGCCTGGGG CAGCCAGATC AGGACCTACA CCCTGCAGCC GTATCGGCTG GTCAAAGACC ACCGCACGAA CACCGAGGCT GGTGACGTGG ACAAAGTGCT CGACGGTGAT ATTGATGTCT TTCTGCGCAG TTACCTGCTG TATCTGCACG GGACCCAGGT CGGGTAA
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Protein sequence | MLQLSDIRKE SLELQEKFES LWRRLDLQGH HDRLKTIEEE LAKPEAWQNP EELTPILREK SRLTEEIESW EALRDLHEDL QEWLEMADED QGQEVLQALS ETNANLAAQL NKVEMELLLS KPEDKGNAIL EIHPGAGGTE AQDWAEMLLR MYLRWCERRG FKVQELDSLP GEEAGIKSVT LQIQGTFAYG LLQAEKGIHR LIRISPFDTS GRRHTSFASV DVYPEAADDI EIDVNDEDIR VDVFRSSGPG GQNVNKTSSA IRITHFPSGI VVQCQNEKSQ RRNKETAMKI LKSRLYDQER KKREADKQAE YASKEAIAWG SQIRTYTLQP YRLVKDHRTN TEAGDVDKVL DGDIDVFLRS YLLYLHGTQV G
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