Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_1865 |
Symbol | |
ID | 8419708 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | + |
Start bp | 2136104 |
End bp | 2137324 |
Gene Length | 1221 bp |
Protein Length | 406 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 645038451 |
Product | diaminopimelate aminotransferase |
Protein accession | YP_003198727 |
Protein GI | 258405985 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
TIGRFAM ID | [TIGR01910] acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.363137 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0244826 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGAGACC GTCTTTTTGC CTATCTGGAC ACCCAACGCG ATGCTATTGT CGATCTGCAG CGGGAATTAG TCGCCCGTCC TGCCCTGGGC CCGGAAAACG GTGGCCAGGG CGAGGTTGAA AAAGCTGAAT TTTTGACCGC TTACCTCAAA GACATGGGGC TGAGCGACAT CCGGGTCCTG CACGCCCCGG ACAACAGGGT TCCCTCCGGC TCCCGGCCGT CCATCGCCGC CGTCCTGCCC GGCAAGGATA CCTCGCGAAC CATCTGGTTC GTGGCCCACA CCGATGTGGT GCCCGCTGGT GACGATTCCC TCTGGGACAG CGACCCCTTC CAACTCCGCC AGGAAGGCGA TCTCCTCTAC GGCCGCGGCG TGGAAGACAA CCACCACGGC CTGGTCGCCG CTCTCCTGAC CGCCAAGGCG TTTGTGCAGG AAGAGGCCCA GCCCGACGTC AATTGCGGCC TGTTGCTGGT GGCTGATGAA GAGACCGGCA ACACCTATGG CCTCGATTAT ATCCTCCGCG AGCACGGCAA TCTGTTCGCT CCGGGCGACC AGTTTCTGGT CCCGGATTTC GGCGTTGAAG ACGGGTCCAC CGTGGAAGTG GCTGAAAAAG GTATGCTCTG GGTCAAGTGC ACGGTCCACG GCCGCCAATG CCACGCCTCC TCCCCCGACC AGGGCGTGAA CTCCTTTGTC GGCGCTTCGG CCCTGGCCCT GCGTCTGCGC GGGCTCTATG AGCATTTTGA CGCCCAGGAC CCCTTATTCG CTCCGCCCTA CTCGACCTTC GAGCCCACGA AAAAGGAAGC CAACGTCCCC AATGTGAACA CCATTCCCGG CCGGGACGTC TTCTATCTCG ATTGCCGGGT GCTGCCCCGC TACGATCTGG ACGATGTCCT GACCAAGGCC CGCCAGGAGG CCGATGTTGT CGAACAGGAT TACGGGGTGC GCGTCGAACT GGAGACCGTC CACCGTGAAT CAGCGCCGGG CACGGACCCG CAGACCCCCA TTGTCCAAAG CGTGCTCACC GCGCTGCGTG ACGTGCGCGG GATCACCGGT CAGGCCAAGG GAGTCGGCGG CGGCACCGTG GCTGCCTATC TGCGCCGGGA CAATCGGCCC GCCGTGGTCT GGAGCACGCT GCTGCACAAC GCCCACCAGC CCAACGAGCA CACGAAAATC AGCAACATCA TAGCCGACGC CAAAGTCATG ACCGCCTTGC TGGTCGAGTA A
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Protein sequence | MRDRLFAYLD TQRDAIVDLQ RELVARPALG PENGGQGEVE KAEFLTAYLK DMGLSDIRVL HAPDNRVPSG SRPSIAAVLP GKDTSRTIWF VAHTDVVPAG DDSLWDSDPF QLRQEGDLLY GRGVEDNHHG LVAALLTAKA FVQEEAQPDV NCGLLLVADE ETGNTYGLDY ILREHGNLFA PGDQFLVPDF GVEDGSTVEV AEKGMLWVKC TVHGRQCHAS SPDQGVNSFV GASALALRLR GLYEHFDAQD PLFAPPYSTF EPTKKEANVP NVNTIPGRDV FYLDCRVLPR YDLDDVLTKA RQEADVVEQD YGVRVELETV HRESAPGTDP QTPIVQSVLT ALRDVRGITG QAKGVGGGTV AAYLRRDNRP AVVWSTLLHN AHQPNEHTKI SNIIADAKVM TALLVE
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