| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1830 |
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| Symbol | |
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| ID | 8419671 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 2100353 |
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| End bp | 2102125 |
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| Gene Length | 1773 bp |
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| Protein Length | 590 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 645038414 |
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| Product | V-type ATPase 116 kDa subunit |
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| Protein accession | YP_003198692 |
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| Protein GI | 258405950 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1269] Archaeal/vacuolar-type H+-ATPase subunit I |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTGTCT CCATGCAAAA GGTCCTGCTT CTGGTCAGCC GCAAACAAGC GTCGCACGCG
CTGCACCGCT TGCAGGATTT AGGCGTCATG CACCTGGCTC CGGAACGCCT CCAGAGCGGG
GTCGATCTTG AGAACGCCCG GCAGCGGCTG GACCAGCTCC GGGACCTGGA ACACCTCCTG
GTCACCCTGC GTCCGCGGCA GCAAACCGAT TGCTCTGCGG AAAAAACTCC GGCCGTGGAG
GAACTCCTGG ATCTGGCCGC GGAGCGCAAG GAACTGCTGC GGCGGCGCAA AGAGGTCCAG
GCCGAATACG ACCGCTACAG CCCGTATGGG GACTTCGACC CCGGTCTGGT CCGCGACCTG
CGCGCCCAGG GACTTGACAT CCGCCTCGTC CAGACGCAAC GCGACACCCG GATCGAGCTC
CCCGAAGACG TGCTCCGCCT CGAGACCGCA CGAACCAAGA CCTCCGTATT CTCCGTCCTC
GTGCGCTACG GCCAGCTGGA CCTGCCGGTG CGGGACACCG CCCTTCCCGA ACGCTCCGTG
CAGGACATGC GCGACGAACT GGAGGCCATT GATGCCCGGG TCACTACAAT CGACACCATC
CTGCGGCAAG CAGCACCGCA TTGCCCGCCG CTGGCCACCC GCAGCCGTCT GGTGCGAGAC
GCTTTCCGGT ATTACGAAGC CCGCTCCGGC ATGGAGGAAT TGGGTCCCGC CCTGTTGGTG
CGGGGCTACA TCCCCCGCCA CGCTCTTTCC AGTCTCCAAA CAGAGGCTCA GCAGCGTGGT
TGGGGCATCC TGACCCTGGA GCCGGAGCCT GAAGAAATCC CCCCTACCTT GCTCCGTCTG
CCGCGTTGGG TCCGCCCCAT CAAGGCGGTC TTCGAATTGA TCGGAGTCCT GCCCGGCTAT
TACGAGACCG ATATCAGCGT CCCGTTCCTG CTCTTTTTGA GCCTCTTTTT CGCCATGATC
GTCGGCGACG CCGGATACGG CCTGGTCTTT CTCGGACTGA CCTGGGTGGG ACGCCGCTTG
ACCCGCTTGC CCAGAGACGC TGTGATCCTG CTGACCGTCA TGAGTCTGTG CACTGTGGGC
TGGGGGCTGG CCGCTGGAAA TTTCTTCGGT CTGGATCCGA CGCCGGGGAT TGTGGCTCCG
CTGCAGCTCG GCTGGCTCAG CGGCCCTGAA GCCGATAGCC ACCTCATGTT GCTCTGCTTC
GTGCTGGGCG GTCTCCAGCT CACCATCGGC CACACCTGGC GAGCCCTGCT CTTTTTTCCC
CACAGCCGTT TCCTGGCCCA GGTTGGCTGG ATTCTGGTCA CCTGGGGCAT GTTCTTTGCC
GCCCGGAGCT TGGTGCTGTT GGCGCCGTTT CCCACTCCGG CCCTGTTGGC CATTGTCCTG
GGCGGGATTT TGGTCGTGGG CTTTCAATTC CCGCTGCGGC AATTCAAACG GTACTGGACT
GAATATGTCC GCTTCCCACT GGATCTGATC AGCAGTTTCG TGGATGTGGT TTCCTACATC
CGGCTTTTTG CCGTCGGCAG CGCCACCTTT GCCATCGCCA ACGCCTTCAA CGAGATGGCC
GCGGGCATCG GCGCCGGCAC CGTATGGGGG CCTCTGCTCG CGGCCCTGAT CCTCTTTTTC
GGGCACTGTC TGAACATCCT GCTGGCCGGA ATGGGGGTCC TTGTCCACGG CGTCCGGCTC
AACACTCTTG AATTTGCAGG ACATACCGGC ATCCAATGGA CAGGGCAGCC ATTTTCTCCC
TTTGCTCGAA GTTCAGGGCG CGGAAGACAG TAG
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| Protein sequence | MIVSMQKVLL LVSRKQASHA LHRLQDLGVM HLAPERLQSG VDLENARQRL DQLRDLEHLL
VTLRPRQQTD CSAEKTPAVE ELLDLAAERK ELLRRRKEVQ AEYDRYSPYG DFDPGLVRDL
RAQGLDIRLV QTQRDTRIEL PEDVLRLETA RTKTSVFSVL VRYGQLDLPV RDTALPERSV
QDMRDELEAI DARVTTIDTI LRQAAPHCPP LATRSRLVRD AFRYYEARSG MEELGPALLV
RGYIPRHALS SLQTEAQQRG WGILTLEPEP EEIPPTLLRL PRWVRPIKAV FELIGVLPGY
YETDISVPFL LFLSLFFAMI VGDAGYGLVF LGLTWVGRRL TRLPRDAVIL LTVMSLCTVG
WGLAAGNFFG LDPTPGIVAP LQLGWLSGPE ADSHLMLLCF VLGGLQLTIG HTWRALLFFP
HSRFLAQVGW ILVTWGMFFA ARSLVLLAPF PTPALLAIVL GGILVVGFQF PLRQFKRYWT
EYVRFPLDLI SSFVDVVSYI RLFAVGSATF AIANAFNEMA AGIGAGTVWG PLLAALILFF
GHCLNILLAG MGVLVHGVRL NTLEFAGHTG IQWTGQPFSP FARSSGRGRQ
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