Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_1827 |
Symbol | |
ID | 8419668 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | + |
Start bp | 2096680 |
End bp | 2098449 |
Gene Length | 1770 bp |
Protein Length | 589 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 645038411 |
Product | V-type ATP synthase subunit A |
Protein accession | YP_003198689 |
Protein GI | 258405947 |
COG category | [C] Energy production and conversion |
COG ID | [COG1155] Archaeal/vacuolar-type H+-ATPase subunit A |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGATC CACACGCCAC TTCCACTGCA CAAAACGACG CCCAGGCCAC GGGGCGTATT GTCGGCGTCA ACGGCAACCT GGTCGTCACG GAATTCGATA CGCCCATCTT CCAGAATGAA ACGGCCCTGG TCCATTGCCA CGATCTCCGC CTCCCGGCGG AAATCGTTCG CATCCGCGGC AACCGGGCCG AAATGCAGAT TTTTGAAGAC ACGAAAGATC TGCGGGTGGG GGACACCGTC AGCTTTTCCG GGGAACTCCT GTCCGTGGAA CTCGGCCCCG GCCTTTTGGG CCAAGTCTTC GACGGGCTCC AAAATCCACT CTACGACATG GCTGAGACCT ACGGCACCTT TCTCCAGCGT GGCGCCAGCC GACCGGCCTT GGACCGCACA CAGCACTGGG AATTCACCCC CGAGGTCGCC GAGGGCGAAG AGGTCAAAGC CGGTTCGTGG CTCGGATCCG TCCCGGAGGG GATCTTTGGC CACAAATTGA TGGTCCCCTT CCATTTGCGA GGCACCTATA CCGTTACGCG TATCAGTCCA GCCGGAACCT ACGACCTCAA CACGCCCCTG GCCACGCTCA CCGGCCCCAA GGGGGAGTCC ATCGAGGTTG GTCTCTACCA GGAATGGCCG GTCAAGATCC CCATCCGGGC CTATGCCGAC CGCCTCCGCC CGACCAAGCC CCTGAGCACG AAAATACGGC TCATCGACAC CTTTTTCCCC ATCGCCCGGG GCGGGACCTA TTGCATCCCC GGTCCGTTCG GTGCGGGAAA AACCGTTATC CAACAATTGA CCAGCCGCCA CGCCGATGTG GACGTCGTCA TTGTCGCCGC CTGCGGCGAG CGGGCCGGGG AGGTCGTGGA GACCATCCGC GAATTTCCCG AGTTGGAAGA CCCGCGCACC GGCCGAAGCC TTATGGAACG CACGATCATC ATCTGCAACA CGAGTTCCAT GCCGGTGGCC GCCCGGGAAG CCTCAGTCTA TACCGCCGTC ACCCTGGCTG AATACTACCG GCAGATGGGA CTCAACGTCC TTTTGCTGGC CGACTCCACC TCCCGCTGGG CCCAGGCCCT GCGCGAACTC TCCGGACGAC TTGAGGAAAT CCCGGGCGAG GAGGCCTTCC CCGCCTACCT CGAATCGGTG ATCGCGGCCT TTTACGAACG AGCCGGCACC ATCCGCCTGC ACAGCGGCGA TGCCGGCTCG GTGACCATTG GCGGCACGGT CAGCCCGGCC GGAGGGAACT TTGAAGAACC TGTGACCCAG AGCACGCTCA AGGTGGTCGG TGCCTTCCAC GGCCTCTCCC GCCAACGCTC CGACGCCCGG CGGTACCCGG CCATCGACCC CCTGGACAGT TGGAGCACCT ACCCCGGGCA GGTCGACCGT GAACAGGTCC AGGCCATGCA CGAACTGCTG CAACACAGCA ACGATATCGA CCAGATGATG AAGGTTGTCG GCGAGGAGGG CACCCCGTTG GAGGACTTTG TGATCTATCT CAAAGGGGAA TTTCTGGACC AGGTCTATTT GCAACAGGAC GCCTTTGACC CGGTCGACGG CGCCACAACC CTCAAACGCC AGAGCTACGT CTTCGACCGA CTGCATTCCT TTTTGCAGAC CTCGATGACC TTTGCGGACA AGGATGCGGC CCGCTCGTTT TTTCAAAAGT TGACCCAGGC GACGATTGAC TGGAACCGGC TCGCCATGGA CAGCGATGAC TTCCACCATC AGGAAAAGCG GCTGGAGCAA CTGGTCGCGG ACGTGACAGA CTATGCGTAA
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Protein sequence | MTDPHATSTA QNDAQATGRI VGVNGNLVVT EFDTPIFQNE TALVHCHDLR LPAEIVRIRG NRAEMQIFED TKDLRVGDTV SFSGELLSVE LGPGLLGQVF DGLQNPLYDM AETYGTFLQR GASRPALDRT QHWEFTPEVA EGEEVKAGSW LGSVPEGIFG HKLMVPFHLR GTYTVTRISP AGTYDLNTPL ATLTGPKGES IEVGLYQEWP VKIPIRAYAD RLRPTKPLST KIRLIDTFFP IARGGTYCIP GPFGAGKTVI QQLTSRHADV DVVIVAACGE RAGEVVETIR EFPELEDPRT GRSLMERTII ICNTSSMPVA AREASVYTAV TLAEYYRQMG LNVLLLADST SRWAQALREL SGRLEEIPGE EAFPAYLESV IAAFYERAGT IRLHSGDAGS VTIGGTVSPA GGNFEEPVTQ STLKVVGAFH GLSRQRSDAR RYPAIDPLDS WSTYPGQVDR EQVQAMHELL QHSNDIDQMM KVVGEEGTPL EDFVIYLKGE FLDQVYLQQD AFDPVDGATT LKRQSYVFDR LHSFLQTSMT FADKDAARSF FQKLTQATID WNRLAMDSDD FHHQEKRLEQ LVADVTDYA
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