Gene Dret_1791 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_1791 
Symbol 
ID8419632 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp2058993 
End bp2060024 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content61% 
IMG OID645038375 
Productprotein of unknown function DUF1566 
Protein accessionYP_003198653 
Protein GI258405911 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCTGG AGCAAACACG CCTCTATCTG GGGACAGGCC AACACCGGTG TTTTGATTCC 
CAGGGGCGTG AGATCCCCTG TGACGGCCAG CGACAAGATG GCGCGATACA AGCCGGTCAA
ACGGTTTCGG CCCCGCGGTT CGTTGTTGAC GGGGAACTTG TCAGTGATCG GTTGACCGGA
CTGCAATGGC CAATGCAAGC GGATCTTTTT CTCTATCCCC TGCGCTGGGA CGAAGCCCTG
GACGCAGTCG CTGAGGCCAA CGCGGCGGGC TTGGCCGGGG CTGATGACTG GCGCGTTCCG
AACCGCCGCG AATTGCGTTC TCTCATTGAC CACAGCAGGC GCAAACCGGT CCTGCCAAAG
GACCATCCCT TCACCGGGGT GCATTTGGGG TGGTATTGGA CGTCGACCAC AGCGGCCATT
GCCCCGGCCT ACGCCTGGTA TGTCCATTTG GCTGGGGGGC GGATGTTTTT TGGCAAGAAG
ACGGAATTTT CTCTCCTCTG GCCAGTGCGT GGACAGTTGG CCCGTCTGCC GCGAACCGGC
CAAACCCAAT GCTTTGATGT TCAGGGGGAG GTCATCGATT GCCGGGAAAG CGCGCAGGAC
GCGGCGTTGC AGCAGGGGTT GCCTTGGCCC GAGGTCCGTT TTGAGCCTTT TGAGGACGGG
ATTCTGGACC GGCTCACCGG ACTTGTCTGG CGCCGCCAGG CGTTCGAAGG CGGGAAGCTT
GTCGACTGGA GTGAAGCCCT GGAACTCGCG GCGGACCTGG CCGAGGCGAG TGGCAGGGCA
TGGCGGTTGC CGAACATCAA CGAACTGGAG AGTCTGGTCG ATGCCTCGCA GAGCCGTCCG
GCCCTGCCCG AGGACCATCC TTTTTCCGGA ATTCAGGAGG CCTATTGGTC CAGCACGACC
AGCGGCTTCG AAACCGATTG GGCCTACGCC CTGTATCTGC ATAAGGGAGC TGTGGGCGTA
GGTTGGAAAA AGAGCCGAGA ATTTGCGGTC TGGTGTGTTC GCGATAGGGA GGCGGGGATA
ACGTCCAGGT GA
 
Protein sequence
MSLEQTRLYL GTGQHRCFDS QGREIPCDGQ RQDGAIQAGQ TVSAPRFVVD GELVSDRLTG 
LQWPMQADLF LYPLRWDEAL DAVAEANAAG LAGADDWRVP NRRELRSLID HSRRKPVLPK
DHPFTGVHLG WYWTSTTAAI APAYAWYVHL AGGRMFFGKK TEFSLLWPVR GQLARLPRTG
QTQCFDVQGE VIDCRESAQD AALQQGLPWP EVRFEPFEDG ILDRLTGLVW RRQAFEGGKL
VDWSEALELA ADLAEASGRA WRLPNINELE SLVDASQSRP ALPEDHPFSG IQEAYWSSTT
SGFETDWAYA LYLHKGAVGV GWKKSREFAV WCVRDREAGI TSR