Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_1603 |
Symbol | |
ID | 8419433 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | - |
Start bp | 1851202 |
End bp | 1851747 |
Gene Length | 546 bp |
Protein Length | 181 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 645038176 |
Product | OstA family protein |
Protein accession | YP_003198465 |
Protein GI | 258405723 |
COG category | [S] Function unknown |
COG ID | [COG1934] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03002] lipopolysaccharide transport periplasmic protein LptA |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAAGAC GACTATTGTT CCTTGGTATG CTGGCGGCGG TGCTGAGCAT GGCCTCTCCC CTGGGAGCCC AGCAGGGCGA GCAAACCGCG CCCATCAAAA TCACCTCGGA TACCATGCGC TACGCCCACG CCGACAAACA GGTCCGTTTC AAGGGGTCTG TGCATGCGAT TCGGGATACT TTTGAGTTGT GGTCCGAGAC CTTGACCGTG TTTCTCAAGG CCGGGGCGGC AGACACCGCT GAAGGCGGCA TGGGCATGGG CGGTGACCAG AGCATCGACC ACCTCGTGGC CGAGGGCGAT GTCCGGCTGC AGGAGGGCAA CCGGACCGGC TATTGCGACA CGGCCTGGTT CTATCCCGAC GAGGGGATGC TGCGTCTCGA AGGATCGCCG CGCCTGGAAC AGGGAGAAAA CAGCATCAGC GGCAGTGTGA TCAAGATGTA TCTCAAGGAG AACAGGAGCG AAGTCATCGG CGGCGACTCC GGGCGTGTCG AGGCCCTGTT CTATTCCCCT GAGGAAGGCT TCGGCGATGC AGACAGCGGA AATTGA
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Protein sequence | MRRRLLFLGM LAAVLSMASP LGAQQGEQTA PIKITSDTMR YAHADKQVRF KGSVHAIRDT FELWSETLTV FLKAGAADTA EGGMGMGGDQ SIDHLVAEGD VRLQEGNRTG YCDTAWFYPD EGMLRLEGSP RLEQGENSIS GSVIKMYLKE NRSEVIGGDS GRVEALFYSP EEGFGDADSG N
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