Gene Dret_1522 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_1522 
Symbol 
ID8419351 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp1766587 
End bp1767030 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content52% 
IMG OID645038096 
Productputative anti-sigma regulatory factor, serine/threonine protein kinase 
Protein accessionYP_003198386 
Protein GI258405644 
COG category[T] Signal transduction mechanisms 
COG ID[COG2172] Anti-sigma regulatory factor (Ser/Thr protein kinase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGACC CCCAAAAAGC TATCACCTTG CGCATCGAAA GTCGCTGGGA ATGCGTTCGT 
CTGGTGGGGT CAGCCTTACG CGGTATCTGC CTGGAACATA CCCAGGACCC GGAGATCGCC
TCCTGTATTG AGTTGGCTGT CTGCGAAGCC ATCAATAATA TCATTGAACA CGGCTATGGT
GGAGAATCCG GTCACGCCAT TGTGGTAGAG GTCCATCTTG AGCTTGGCCG AATAGGTATC
CGCACCAAGG ATACGGGCAA ATCTTTTTCT CCTGAAAGGG CTGGAGGCCG GGTACCAGCT
TCGGCATGCG ATTGCAGCGA AATCCGCCTC CGTGGCCGGG GATTGCACAT CATCACGTCA
ATCATGGACA CTTGGTCCTA CGAAACACAT TCTGACGGGA CCAATTTTTT GCAGCTCACA
AAATATATCA GATCTACGGT ATGA
 
Protein sequence
MSDPQKAITL RIESRWECVR LVGSALRGIC LEHTQDPEIA SCIELAVCEA INNIIEHGYG 
GESGHAIVVE VHLELGRIGI RTKDTGKSFS PERAGGRVPA SACDCSEIRL RGRGLHIITS
IMDTWSYETH SDGTNFLQLT KYIRSTV